LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g0511	ATGGTTACAGAACATTGGTTTTTATTATCCCGCCTTGTTATTGTTGTGTCCATCTCCATCCTCTTCATGTCCAAATCATGTTCATGTGGAATTCAATATATTGGTTCAATCTCACCTGGAATGCAAGGTTCACAAATGACTTGGATTGACAGACACGGCAAATTCCTCCTCTCAAAAACCCAAAATTTTGCTTTTGGTTTTGTCACCACCGCCAACGACACCACCAAGTTTCTATTAGTAATTGTCCATGTTTCTAGCTCCACCGTGATTTGGACTGCTAATAGAGCTAAACCCGTTTCTAACTCTGATAATTTCATTTTTGATAAAAAGGGTAATGCTTTTTTACAAAAAGATGGAATTTTGATCTGGTCTACAAACACAAACAATATAGGGGTTTCTTCAATGGTATTGGAAGATAGTGGGAATTTGGTTTTGCTTGGGAATGATAACAGTACGGTAATATGGCAAAGTTTTGAGTTTCCAACTGATACTTTGATGCCTGAACAGGTTTTCAAAGAAGGAATGAAACTTACTAGTGAACCTAATTCAAATAATTTGACCTATGTTCTTGAAATTCAATCTAGTAATGTTGTTCTTTCAGCTGGTTTCAAAATACCACAGATTTATTGGACTATACAGAAGGATAACCGTAAAACCAATAATAAGAAAGGTGATGTTGTGGTTTCTGCAAATCTCAGTAACAATTCTTGGAGATTCTATGACGAGAAAAAATCTTTGTTGTGGCAATTCATTTTCTCTGCTGATGCAGGTGTAAATGCAACTTGGGTTGCTGTTTTGGGAAATGATGGTTTTATTACTTTCTCTAATCTCAACCGTGGTGGATCAAAAGGTGATTCTTCAATGAGGATACCGCAAGATCGTTGTGGTACACCGGAGCCTTGTGATCCTTACAGCATTTGCACAAACAACGGTAGGTGTACCTGTCCTTCTGTTGTTCCTAAATGCAAACCTGGTTTTGTTTCTCCTTGTGATGATAAATCAGAAAAACGTATTGAATTTCTGAAAGCTGATAAAGGAATAAGTTACTTTGCACTTGATTTTCTTCAGCCCTTTTCAAAAACCGATTTATCTGGCTGTCAAACATCGTGCCGTGAAAATTGCTCTTGTCTAGCAATGTTCTTCCATAGAAGTTCAGGAAACTGTTTCCTGTTGGAAAGTTTAGGAAGTTTTATTAAGAAATCTGATAATGGTGACTCTGGTTATGTTTCTTACATTAAGGTCTCAAGTGATGGAGGCAAAAAAGGAAGTGGAACTAGCAATAAACATGTCATCATCATTATTGTTGTTGTTATTATTGTCATATTAACTTTGTTTGTGATTTCTGTTCTGCTCTTTGTTGGGATTGGATATTACAGGGAAAAGAAAAAGTTACCCGAATCTCCTAGAGAGAATTCAGAAGAGGACATTTTCTTGGAAAATTTAACCGTTATGCCGATCCGTTATGGATACAAAGATCTCGAAGTTGCAAGTAATAACTTCTCAGTGAAGCTTGGTCAAGGAGGTTTTGGTTCAGTTTATAGAGGAGCTCTACCTGATGGAACTCAATTAGCTGTGAAGAAATTGGAAGGTATTGGTCAGGGGAAGAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGAAGCATTCATCACCTTAATTTGGTAAGGCTTAAAGGATTTTGTGCAGATGGAACTCATAGGCTTTTAGTTTATGAGTATATGGCAAATAACTCATTGGATAAATGGATATTCAAGAAGAAAAAAGGTGAATTTCTTTTGGATTGGGATACAAGGTATAACATAGCATTAGGAACGGCAAAAGGGCTGGCTTATCTACATGAAGATTGTGACTCAAAGATCATTCACTGTGACATCAAGCCAGAAAATGTACTTCTTGATGAACATTTCATGGCCAAAGTTTCAGATTTTGGTTTAGCCAAGCTCATGAATAGAGAACAAAGTCATGTTTTTACAACATTGAGAGGAACACGTGGCTACCTTGCACCTGAATGGATAACAAGGTATGCTATATCAGAGAAAAGTGATGTATACAGCTATGGGATGGTATTGCTAGAGATTATTGGTGGAAGGAAGAACTATGATAGTAATGAGAGTTCAGAGAAAAACTATTTCCCTAGTTTTGCTTTTAAGATGATGGAAGAAGGGAAAGTGAGAGATATAGTTGATTCAGAGTTGAAAATTGATGAGCATGATGATAGAGTTCACTGTGCTATAAGGGTTGCATTGTGGTGTATACAAGAAGACATGTCTTTGAGACCTCCAATGACAAAAGTTGTTCAAATGTTGGAAGGTCTTTGTACTGTTCCTAAACCACCAACTAGTTCTTATTTGGGTTCTCGTCTTTATTCTATGTTTAGATCATCTAGTCAAGGTGGTAGCTCTTCTGGTCCATCATATTGTAGCAGTGATGCTTATCTTTCAGCGGTTCGTCTTTCTGGCCCAAGATAA	2466	0.3706	MVTEHWFLLSRLVIVVSISILFMSKSCSCGIQYIGSISPGMQGSQMTWIDRHGKFLLSKTQNFAFGFVTTANDTTKFLLVIVHVSSSTVIWTANRAKPVSNSDNFIFDKKGNAFLQKDGILIWSTNTNNIGVSSMVLEDSGNLVLLGNDNSTVIWQSFEFPTDTLMPEQVFKEGMKLTSEPNSNNLTYVLEIQSSNVVLSAGFKIPQIYWTIQKDNRKTNNKKGDVVVSANLSNNSWRFYDEKKSLLWQFIFSADAGVNATWVAVLGNDGFITFSNLNRGGSKGDSSMRIPQDRCGTPEPCDPYSICTNNGRCTCPSVVPKCKPGFVSPCDDKSEKRIEFLKADKGISYFALDFLQPFSKTDLSGCQTSCRENCSCLAMFFHRSSGNCFLLESLGSFIKKSDNGDSGYVSYIKVSSDGGKKGSGTSNKHVIIIIVVVIIVILTLFVISVLLFVGIGYYREKKKLPESPRENSEEDIFLENLTVMPIRYGYKDLEVASNNFSVKLGQGGFGSVYRGALPDGTQLAVKKLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEYMANNSLDKWIFKKKKGEFLLDWDTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDEHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITRYAISEKSDVYSYGMVLLEIIGGRKNYDSNESSEKNYFPSFAFKMMEEGKVRDIVDSELKIDEHDDRVHCAIRVALWCIQEDMSLRPPMTKVVQMLEGLCTVPKPPTSSYLGSRLYSMFRSSSQGGSSSGPSYCSSDAYLSAVRLSGPR*	822

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g0511	821	Gene3D	Transferase(Phosphotransferase) domain 1	573	776	-	-
	Mal2g0511	821	SUPERFAMILY	alpha-D-mannose-specific plant lectins	89	179	IPR036426	-
	Mal2g0511	821	Pfam	Protein kinase domain	502	766	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g0511	821	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	12	821	-	-
	Mal2g0511	821	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	619	631	IPR008271	GO:0004672\|GO:0006468
	Mal2g0511	821	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	12	821	-	-
	Mal2g0511	821	CDD	STKc_IRAK	504	771	-	-
	Mal2g0511	821	Pfam	D-mannose binding lectin	88	171	IPR001480	-
	Mal2g0511	821	SUPERFAMILY	Protein kinase-like (PK-like)	479	769	IPR011009	-
	Mal2g0511	821	Gene3D	-	50	160	IPR036426	-
	Mal2g0511	821	SMART	serkin_6	498	768	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g0511	821	CDD	PAN_AP_plant	353	415	-	-
	Mal2g0511	821	Gene3D	Phosphorylase Kinase; domain 1	462	572	-	-
	Mal2g0511	821	CDD	B_lectin	53	161	IPR001480	-
	Mal2g0511	821	PIRSF	SRK	6	816	IPR024171	GO:0004674
	Mal2g0511	821	ProSiteProfiles	Protein kinase domain profile.	498	771	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal2g0511	821	ProSitePatterns	Protein kinases ATP-binding region signature.	504	527	IPR017441	GO:0005524
	Mal2g0511	821	ProSiteProfiles	Bulb-type lectin domain profile.	41	158	IPR001480	-
	Mal2g0511	821	SMART	blect_4	47	161	IPR001480	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g0511	Mal-Chr2	5999097	6001562	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g0511	445	780	Receptor kinase-like Gene Family	AT5G20050	45.833	4.55e-95	303

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mal2g0511		Pkinase	3.9e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g0511	-		-	gmx:100791158	1228