Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0480 ATGGCATCTTCATCATCCTCAAGCAACACCGCCAGCTACGACGTGCCGTGGGTTGAAAAGTACCGACCCAGCAAAGTCGTCGACATCGTCGGCAATGAAGACGCCGTCTCCCGTCTCCAAGTCATCGCTCGTGAAGACAACATGCCCAACCTCATTTTATCAGGTCCTCCTAGAACTGGTAAAACCACTAGTATTCTTTCCCTAGCTCACGAGCTTCTCGATCCCAATTACAGAGAAGCTGTTCTCGAACTCAATGCATCAGATGATAGAGGAATAGATGTTGTGAGGAACAAAATCAAGATGTTTGCTCAAAAGAAAGTAACTCTTCCTCCAGGCCGACACAAAGTTGTTATACTTGATGAAGCTGACAGCATGACATCTGGAGCACAACAAGCTTTGAGAAGGACAATGGAGATATATTCTAATTCTACCCGTTTCGCGCTTGCTTGCAATACATCTTCTAAGATTATTGAGCCAATTCAGAGTAGGTGTGCCATTGTGCGATTTTCACGATTGTCTGATCAAGAGATACTCGGTCGTCTTATGGTTGTGGTTCAAGCTGAGAAGGTTCCCTATGTTTCTGAAGGACTTGAGCCATCATTTTCACTGCTGATGGTGATATGA 624 0.4503 MASSSSSSNTASYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIAREDNMPNLILSGPPRTGKTTSILSLAHELLDPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPYVSEGLEPSFSLLMVI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0480 207 SMART AAA_5 47 173 IPR003593 -
Mal2g0480 207 PANTHER REPLICATION FACTOR C SUBUNIT 2 6 198 - -
Mal2g0480 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 192 IPR027417 -
Mal2g0480 207 Gene3D - 8 172 IPR027417 -
Mal2g0480 207 Pfam ATPase family associated with various cellular activities (AAA) 51 169 IPR003959 GO:0005524|GO:0016887
Mal2g0480 207 CDD AAA 30 167 - -
Mal2g0480 207 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 6 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0480 Mal-Chr2 5523052 5526446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0480 1 198 Core DNA Replication Machinery Family AT1G63160 89.394 4.07e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0480 K10755 - rcu:8265440 355.91