Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0425 ATGTCATCATCGGCAGTGAGAAACAAGAGCTCCGGTGGTGACGAAGGCGAACACTACCCTCCTCCACTCGCCTCTCACAACGACGTCGTTAATGACCCTACCCTCTTTTGGGACACTCTTCGTCGCTTTCACTTTCTTATGGCTACCAAATTCATGATTCCTGTGATTGGAGGTAAGGAGCTTAATTTGCACGTTCTCTACGTGGAAGTTACAAGGAGAAGCGGTTATGAGAAGGTTGTTGCGGAGAAGAAATGGAGAGAAGTAGGTAGTATATTTAGATTCTCATCTACCACTACAAGCGCTTCTTTTGTACTAAGAAAACACTATTTGAATCTTCTTTACCATTACGAACAAGTTCATTTCTTCAAAGTTCAAGGTCCTATTTACACTCCCTCACCAGATGCATTTTCTGGTAACAGTCCCTCGTGGAAACCTGAATTAGCTATTGTTCAATATTCACCTAAGATGGTAAATGATAGTGCTGAATCTCATGATGAAGTTCATGTAGATAATTCATGTCTTTTGGGAAAAGGAACTATTGAAGGAAAATTTGATTGTGGTTATATAGTGTCGGTGAAATTGGGTTCAGAGGTTCTGAAAGGGGTGCTTTACCATCCAGAAAAAGTGGTTGCTCCTCCACCATTGGTTCCACAACATAACAGTGCCATTGTTCCATTCAATCACAAATCTCATCGCTCTGGTAGGAGGAGAAGAAAAAGAAAGTGGGACCCTAACTATCCAAAACCAAATAGGAGTGGCTATAACTTCTTCTTTGCTGAAAAGCATTACAAGCTCAAAGAACTCTACCCAAACAAAGAAAGGGAGTTTACCAAAATGATTGGTCAGTCCTGGAATAGTCTCAGCCCTGAAGAAAGAATGATATACCAAAACATTGGTTTAAGGGACAAAGAAAGGTACAAAAGAGAATTGACGGAGTACAAAGAGAAAATGAAGGTTGGGCAGACAGAAGAACTTGGCGTCCATAAATCTCAGTGGTAG 999 0.4104 MSSSAVRNKSSGGDEGEHYPPPLASHNDVVNDPTLFWDTLRRFHFLMATKFMIPVIGGKELNLHVLYVEVTRRSGYEKVVAEKKWREVGSIFRFSSTTTSASFVLRKHYLNLLYHYEQVHFFKVQGPIYTPSPDAFSGNSPSWKPELAIVQYSPKMVNDSAESHDEVHVDNSCLLGKGTIEGKFDCGYIVSVKLGSEVLKGVLYHPEKVVAPPPLVPQHNSAIVPFNHKSHRSGRRRRKRKWDPNYPKPNRSGYNFFFAEKHYKLKELYPNKEREFTKMIGQSWNSLSPEERMIYQNIGLRDKERYKRELTEYKEKMKVGQTEELGVHKSQW* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0425 332 Pfam HMG (high mobility group) box 247 314 IPR009071 -
Mal2g0425 332 MobiDBLite consensus disorder prediction 1 25 - -
Mal2g0425 332 Pfam ARID/BRIGHT DNA binding domain 35 117 IPR001606 GO:0003677
Mal2g0425 332 Gene3D - 24 127 IPR036431 GO:0003677
Mal2g0425 332 Coils Coil 303 323 - -
Mal2g0425 332 CDD ARID_HMGB9-like 32 117 IPR045303 GO:0003677
Mal2g0425 332 Gene3D High mobility group box domain 232 330 IPR036910 -
Mal2g0425 332 SUPERFAMILY ARID-like 26 130 IPR036431 GO:0003677
Mal2g0425 332 SMART ARID_2 27 117 - -
Mal2g0425 332 SMART bright_3 31 122 IPR001606 GO:0003677
Mal2g0425 332 ProSiteProfiles ARID domain profile. 30 121 IPR001606 GO:0003677
Mal2g0425 332 MobiDBLite consensus disorder prediction 229 244 - -
Mal2g0425 332 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 8 324 - -
Mal2g0425 332 CDD HMGB-UBF_HMG-box 247 310 - -
Mal2g0425 332 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 8 324 - -
Mal2g0425 332 MobiDBLite consensus disorder prediction 228 247 - -
Mal2g0425 332 SUPERFAMILY HMG-box 244 317 IPR036910 -
Mal2g0425 332 SMART hmgende2 246 315 IPR009071 -
Mal2g0425 332 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 247 314 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0425 Mal-Chr2 4702427 4704348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0425 2 319 ARID Transcription Factor Family AT1G76110 59.451 4.77e-129 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal2g0425 ARID 3.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0425 - - gmx:100784746 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0425 2 4702427 4704348 Mal2g0425 2 4702427 4704348 ECH