Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0390 ATGGGAGATGGTGCTGCGGTGACATCATCTGCAACCATGATGGAAGCTCCTCCACCACAAGATGAAAATTCAATGGATTTTGATTACATGAGTGAACTTTTGTTAGATGGTTGTTGGTTGGAAGCTTCTGCTGATGGATCTGAGTTCTTGCTGCAAAGTTCTCCTTTTTCCAATCCAATCTTTGACCCTTCATTCTCTTGGCCTGCCTTGGAGAATACTGAGCCACCCCCCAATGAGGATCGAGATGAATCACAAGATGCTCGACTTAGAACCGAAGAAGAAAGCCGGATTGTAGTTAATAATGTTGGTAGTAGCCACCGGCAGCGGTGTCAGTACGAGACTCATTCGGGTGAAGGGGTTAGTAGGTTGTGGATTCCACCGACACCTAATCAAGGACCTGGTGGATCTTCCATAATGGAGAAGCTGATAAGGGCTCTCAACTGGATCAAAGATTCCAATAGGAACAAAGATATGCTTATACAAATATGGGTGCCGGTTAATAGAGGGGATGACAGGCCAATTCTGAGAGCTAATGATCTTCCTTTTTCACTTGAATCAAGTTCTTTAAACCTTGCAAAGTACCGAGAAATCTCTGTGAGATATCAGTTTTCTGCAGAGGTGGAGGACTCAAAGGAGTTGGTGGCGGGTTTGCCTGGTCGAGTTTATAGGGATAAGATTCCTGAGTGGACACCTGATGTTCGATTCTTCAGGAGTGATGAGTATCCGCGAGTTGACCACGCTCAAGAGTGTGATATACACGGAACATTAGCGGTTCCAGTATTTGAACAAGGGAGCAGGACATGTTTGGGCGTTATTGAAGTGGTGATGACTACACAGCAGAGCAACTATGGCCGTGAGCTTGAGACTGTTTGCAAAGCACTTGAGGTTGTTGATCTCAGAAGCTCTGGACATTCAAGTCTTCCAAATGTGAAGGCATGCGACAAGTCCTATGAAACCGCACTACCCGAGATTCAAGAGGTTTTGAGATCTGCATGTGAAATGCACAAATTACCTCTGGCTCAGACTTGGGTCTCTTGCATCCAACAGGGAAAAGATGGGTGCCGACACTCTGATGATAATTACGCAGCCTGTATATCTCCGGTGGAGTATGCTTGCTATGTTGGTGATTCCTCGGTCAGGTTTTTCCATGAGGCTTGCATGGAGCATCACTTGTTAATAGGTCAAGGTGTTGCCGGGGGTGCTTTTATGACTAACCAACCGTGCTTCTCGACCGACATAACTTCTTTAAGCAAGACAGATTATCCATTGTCTCATCATGCCAGGTTGTTTGGATTACGTGCTGCAGTTGCTATTCGTCTCCGAAGCATCTATAGTACTTCAGACGACTATGTTCTTGAGTTCTTCTTACCTGTAGATTGCAATGACAGTGAAGAACAGAAGAAGATGCTCACATCATTGTCCATGATTATTCAAAGGGTTTGCCGCAGTTTGCGAGTTATAACAGATAAGGAATTGGAGAAAAATAACTTATCAGCTAATGAAGTGATGCCCGTTGCTGATAGTGGATTTGCTACGAATGCAATTCGGTCGGAACTCCAACACAGGAGGATGGCTTCCTCATTGGACGATGAAGAAAAGTTTAATGAAACAATGGCTAGAAAGTTCTCGGAACAAAGGCGGCAACAAGAAAATCTTACTTTAAAAGGAGATGTTGACTGTGGTAGGGAGTGTTCTCCTTCTGTTGAGGGTAACTTCTTGTCAAGTTTGGGAGTAAATAGAACAGGAGAGAAAAGACGGGCCAAGGCAGAGAAAACTATCACTCTTCAAGTCCTTAGGCAATATTTCGCTGGAAGTCTAAAGGATGCTGCGAAGAATATTGGTGTATGTACTACAACTCTGAAAAGGATCTGCAGGCAACATGGTATAAAGCGTTGGCCTTCTCGGAAGATAAAAAAGGTTGGTCACTCCTTGCAGAAACTTCAGCTCGTCATTGACTCTGTTCAAGGTGCCTCCGGGTCATTTCAAATTGATTCCTTCTATTCAAAATTCTCGGATCTATCGTCTCCAAATTTATCAGGAACCACCCTGATCTCAACACTTAATCAAGTCGATAATCCAGTCTCATTAAGCATACAGCCAGATCCAGACTCAATGAGCCCAGAAGGTGCATCAAAATCACCCTCCTCTTCATGTAGTCAAAGTTCCTTTTCAAGCCATTCCTGTTCCATCATGTCAGAGCAACAACACCACACAAGCAATGTTGCTGCTGGTAACAAAGATTCATTGGTTGGTGAAGATTCTGTTGATGTTGTGTTGAAGAGAATCAGAAGTGAAGCAGAACTTAAAAGCCTCAATCATGATAATAAAGCAAAGCTCATGCCAAGATCAATAAGCCAGGAAACACTTAGTGAACACCTGAAAACCAATTATCACGAATCCGTGTTAAAAACCACTCGCAAAGCGTCTCAAAAGGAGGATGCTCATAGAGTAAAAGTTACATTTGGAGACGAGAAAACCCGGTTTAGGTTGCCAAAGAATTGGTGTTATGAAGATCTTGTGCAGGAAATTGCTAGGCGATTTAATGTAAGTGAAATGAGCAAATTCGATATCAAATATTTGGACGATGATTATGAATGGGTATTACTAACTTGTGATGCAGATTTGGAGGAGTGCATTGATGTTTGTCGATCTTCTGAGACTAGTACCATCAAACTTTGTCTACAACCCTCCAGTAATTTTATAAGGAGTTCTTTAGAATTTAGATAG 2727 0.4294 MGDGAAVTSSATMMEAPPPQDENSMDFDYMSELLLDGCWLEASADGSEFLLQSSPFSNPIFDPSFSWPALENTEPPPNEDRDESQDARLRTEEESRIVVNNVGSSHRQRCQYETHSGEGVSRLWIPPTPNQGPGGSSIMEKLIRALNWIKDSNRNKDMLIQIWVPVNRGDDRPILRANDLPFSLESSSLNLAKYREISVRYQFSAEVEDSKELVAGLPGRVYRDKIPEWTPDVRFFRSDEYPRVDHAQECDIHGTLAVPVFEQGSRTCLGVIEVVMTTQQSNYGRELETVCKALEVVDLRSSGHSSLPNVKACDKSYETALPEIQEVLRSACEMHKLPLAQTWVSCIQQGKDGCRHSDDNYAACISPVEYACYVGDSSVRFFHEACMEHHLLIGQGVAGGAFMTNQPCFSTDITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYSTSDDYVLEFFLPVDCNDSEEQKKMLTSLSMIIQRVCRSLRVITDKELEKNNLSANEVMPVADSGFATNAIRSELQHRRMASSLDDEEKFNETMARKFSEQRRQQENLTLKGDVDCGRECSPSVEGNFLSSLGVNRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGSFQIDSFYSKFSDLSSPNLSGTTLISTLNQVDNPVSLSIQPDPDSMSPEGASKSPSSSCSQSSFSSHSCSIMSEQQHHTSNVAAGNKDSLVGEDSVDVVLKRIRSEAELKSLNHDNKAKLMPRSISQETLSEHLKTNYHESVLKTTRKASQKEDAHRVKVTFGDEKTRFRLPKNWCYEDLVQEIARRFNVSEMSKFDIKYLDDDYEWVLLTCDADLEECIDVCRSSETSTIKLCLQPSSNFIRSSLEFR* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0390 908 MobiDBLite consensus disorder prediction 62 94 - -
Mal2g0390 908 MobiDBLite consensus disorder prediction 694 746 - -
Mal2g0390 908 PANTHER PROTEIN NLP8 22 904 IPR045012 GO:0003700
Mal2g0390 908 Gene3D - 810 896 - -
Mal2g0390 908 Pfam RWP-RK domain 592 640 IPR003035 -
Mal2g0390 908 PANTHER PROTEIN NLP4 22 904 - -
Mal2g0390 908 CDD PB1_NLP 815 896 IPR034891 -
Mal2g0390 908 SMART PB1_new 814 897 IPR000270 GO:0005515
Mal2g0390 908 ProSiteProfiles RWP-RK domain profile. 579 660 IPR003035 -
Mal2g0390 908 MobiDBLite consensus disorder prediction 1 23 - -
Mal2g0390 908 Pfam PB1 domain 815 896 IPR000270 GO:0005515
Mal2g0390 908 ProSiteProfiles PB1 domain profile. 814 897 IPR000270 GO:0005515
Mal2g0390 908 MobiDBLite consensus disorder prediction 694 745 - -
Mal2g0390 908 SUPERFAMILY CAD & PB1 domains 808 899 - -
Mal2g0390 908 MobiDBLite consensus disorder prediction 75 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0390 Mal-Chr2 4335535 4342029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0390 14 899 NLP Transcription Factor Family AT1G20640 49.109 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal2g0390 PB1 1.1e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0390 - - gmx:100790922 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0390 2 4335535 4342029 Mal2g0390 2 4335535 4342029 ECH