Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0381 ATGAAAGGAGCAAAGTCCAAGGGTGAATCGAAGAAAGCCGATGCTAAGCTTGCTGTGAATAAGAAGGGCGCCGCCACTACTAAGGGCGGAAGGAAACCAGCCAAGGGAAAGGAACCAAAAGACCCTAACAAGCCTAAGAGACCTCCAAGTGCTTTCTTCGTTTTCATGGAGGATTTTAGGAAGCAGTTCAAGAAGGATAACCCTGACAACAAAGCTGTGTCCGCTGTGGGCAAAGCTGCTGGAGCAAAATGGAAGTCAATGTCTGAAGCTGAGAAAGCACCATATGTTGCAAAAGCAGAGAAAAGAAAGGTGGAGTATGAGAAGACCATGAAGGCCTATAACAAGAAACAGGCTGAAGGTCCAGCTGCTGGTGAGGAAGAAGAGTCTGGGAAATCAGAATCTGAAGTGCACGATGAGAATGACGATGAGGATGAGGATGGCAGTGATGAGGACGATGACGAGTAG 465 0.4753 MKGAKSKGESKKADAKLAVNKKGAATTKGGRKPAKGKEPKDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSMSEAEKAPYVAKAEKRKVEYEKTMKAYNKKQAEGPAAGEEEESGKSESEVHDENDDEDEDGSDEDDDE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0381 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 151 - -
Mal2g0381 154 MobiDBLite consensus disorder prediction 113 154 - -
Mal2g0381 154 SMART hmgende2 44 115 IPR009071 -
Mal2g0381 154 MobiDBLite consensus disorder prediction 137 154 - -
Mal2g0381 154 Coils Coil 96 116 - -
Mal2g0381 154 Gene3D High mobility group box domain 29 129 IPR036910 -
Mal2g0381 154 MobiDBLite consensus disorder prediction 1 18 - -
Mal2g0381 154 MobiDBLite consensus disorder prediction 1 51 - -
Mal2g0381 154 SUPERFAMILY HMG-box 36 118 IPR036910 -
Mal2g0381 154 MobiDBLite consensus disorder prediction 31 45 - -
Mal2g0381 154 MobiDBLite consensus disorder prediction 113 136 - -
Mal2g0381 154 CDD HMGB-UBF_HMG-box 45 111 - -
Mal2g0381 154 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Mal2g0381 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 151 IPR031061 -
Mal2g0381 154 Pfam HMG (high mobility group) box 45 114 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0381 Mal-Chr2 4218610 4219950 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal2g0381 HMG_box 2.9e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0381 K25507 - lang:109352139 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0381 2 4218610 4219950 Mal2g0381 2 4218610 4219950 ECH