Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0379 ATGGATGCAGAGCATGAGAATGGTACTACCACTACTACTATTATTGGAGGTGGTGGAGGGCTTTATGTGAAAGTGATGACCGATGAACAAATGGAACTTTTGAGACAACAGATATCTGTTTACACTACCATTTCTGACCAGCTTGTTCAGATGCACAAATCCATTACCACTCAACACGACCTCGCAGGACTGAGGCTGGGTAATTTGTACTGTGATCCACTGATGGCATGCTCTGGACACAAGATAACTTCCAGGCAGCGTTGGACTCCAACGCCTCTCCAGCTTCAAATACTTGAGCGTATTTTCGATGAAGGCAATGGCACTCCCTCCAAACAGAAGATCAAAGACATAACAATTGAACTAGGGCAACACGGTCAAATATCCGAGACAAATGTTTATAATTGGTTCCAGAACAGAAGAGCTCGTTCAAAGCGCAAGCAATCATCAGTTCCTACAGGAAATCATGCAGAGCCAGAGGCAGAGACGGAAGTTGAGTCTCCAAAAGAGAACAAAACGCGTGAAGAAAGCGATCAAGTTCAGCTCTTTGAGAGTTTATCACCTCATCGGGTCAAGGATATGTACATTCAGAGTCCTGACATAGGATTTGAGCACTTGTTGGGAAAAATTGAAGTTGCAGGCTGCTATAGTTCTTACCTTCTTTGA 663 0.4389 MDAEHENGTTTTTIIGGGGGLYVKVMTDEQMELLRQQISVYTTISDQLVQMHKSITTQHDLAGLRLGNLYCDPLMACSGHKITSRQRWTPTPLQLQILERIFDEGNGTPSKQKIKDITIELGQHGQISETNVYNWFQNRRARSKRKQSSVPTGNHAEPEAETEVESPKENKTREESDQVQLFESLSPHRVKDMYIQSPDIGFEHLLGKIEVAGCYSSYLL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0379 220 MobiDBLite consensus disorder prediction 143 178 - -
Mal2g0379 220 Pfam Homeodomain 85 145 IPR001356 GO:0003677
Mal2g0379 220 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 220 - -
Mal2g0379 220 SUPERFAMILY Homeodomain-like 84 148 IPR009057 -
Mal2g0379 220 MobiDBLite consensus disorder prediction 158 178 - -
Mal2g0379 220 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Mal2g0379 220 Gene3D - 86 150 - -
Mal2g0379 220 SMART HOX_1 83 150 IPR001356 GO:0003677
Mal2g0379 220 CDD homeodomain 85 147 IPR001356 GO:0003677
Mal2g0379 220 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 220 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0379 Mal-Chr2 4204976 4206739 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0379 21 218 Wox Gene Family AT4G35550 53.097 3.33e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal2g0379 Homeodomain 1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0379 - - var:108342525 340.887