Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0351 ATGACTCGTCCCTTCAGATTTCTCGGCGAGCTCAACTCGTCTTCTTCCGAATCACCTGATTCCGCCGTCGTTGATTCTGATTTCGTCGTCATCCTCGCCGCTCTCCTCTGCGCTCTCATCTGCGTTCTAGGTCTCGTCGCCGTCACCCGCTGCGGTTGTCTCCGCCGCTTACGTCTCTCGTCCGCCGCCAACGCTTCTCCAGCTACACCTCCCGCTGCAGCAAACAAAGGCGTCAAGAAGAAAGTTCTACGCTCTCTTCCAAAAGTCACAGCAACAGAAGAATCCGCGGTGAAATTCTCCGATTGCGCTATCTGTTTGAGCGAATTCACCGCCGGAGATGAAATCCGAGTGTTACCTCAGTGCGGTCATGGATTCCACGTCTCTTGTATCGATTTATGGCTCAGATCTCATTCTTCGTGTCCTTCTTGCCGTCAGATTCTGGTTGTTTCTAGATGCGATAAGTGCGGTGGGATTCCCGCTCCCGCCGTAACTACCGCTGCCGGCTCCAGCTCTACGTCGGCGCCGGATTGTGAAGCTAGATTAAAGAGCAGTGACTGA 558 0.5394 MTRPFRFLGELNSSSSESPDSAVVDSDFVVILAALLCALICVLGLVAVTRCGCLRRLRLSSAANASPATPPAAANKGVKKKVLRSLPKVTATEESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQILVVSRCDKCGGIPAPAVTTAAGSSSTSAPDCEARLKSSD* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0351 185 Pfam Ring finger domain 101 144 IPR001841 -
Mal2g0351 185 SMART ring_2 102 143 IPR001841 -
Mal2g0351 185 MobiDBLite consensus disorder prediction 164 185 - -
Mal2g0351 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 148 IPR013083 -
Mal2g0351 185 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 183 - -
Mal2g0351 185 SUPERFAMILY RING/U-box 83 150 - -
Mal2g0351 185 PANTHER RING-H2 FINGER PROTEIN ATL8 1 183 - -
Mal2g0351 185 CDD RING-H2_PA-TM-RING 101 144 - -
Mal2g0351 185 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0351 Mal-Chr2 3881792 3882762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0351 5 155 C3H Transcription Factor Family AT1G20823 66.038 2.69e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0351 - - gmx:100794614 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0351 2 3881792 3882762 Mal2g0351 2 3881792 3882762 ECH