Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0348 ATGATGTTAGCAATAGAAGAAGTACTTTGTGAACTTAGTGATCATGAAAAGAAAAACGAGCAAGGTCTACCACCTGGTTTCAGGTTTCACCCCACTGATGAAGAACTCATTACCTTTTATTTGGCTTCCAAAGTTTTTAAAAATACTTGTTTCAATAATCTCAACTTTGCTGAAGTTGACCTCAATAGATGTGAGCCATGGGAACTTCCAGAAATGGCAAAGATGGGTGAAAGAGAGTGGTATCTGTTCAGCTTGAGAGACAGAAAGTACCCAACTGGTCTAAGAACAAACAGAGCAACCGGTGCTGGTTACTGGAAAGCCACTGGGAAGGACAAAGAAGTTTACAGCTGTGGTAGTAGATCCTTATTAGGCATGAAGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCACGTGGTGAAAAGACCAAATGGGTCATGCATGAGTACCGTTTACACTCTCCTCATCACTTTTCCACTTCTTCTCATACTACTACCTGCAAGGAAGAGTGGGTGATATGCAGGATATTTCATAAATCAGGGGAAAAGAGAAATTCACTGCTCCAAATTCAAGGACATTTAGGTGCTAATCCTAATTTAACCTCCCAAAAAACCTGTTTACCTCCTCCTCCACCTTTACTTGCAACGTCATTTACACAACAACTAGACCAAAATGACCAATTGCTTTCCAATTCTCATAATATTTTCCCATTGCATTCATTCCAACCTTCCTTCCCAATGATGAACCACACCACAAGAAACAACAACAATCCATCTTCAGAACTACTCTTCAAGTCACAACAAAATTACACCATGAAGCAAACCATTCCAAAAACTGAGGCTACATTCTATGATCAACACCAATCATCACAATCAATAAATGATGCTATTAACCTGAGATGGATTATTGACAATTCAAGTAATAATAACTATCAAAACTCCTTATTCCCTGTTGAGATGGATGGTGCTGATGATCTGATTGCATTCTCAGGAGCTGCTACAAATGCTGAATTTAGGGACATGTCAATTATTAACAGTAGAGGAGGAGGAGGAGTAGGCTTAGATGCTCCTAGTCCTATGGGAATAGATTCTTGGCCACATGCCCAACTTGTCTAA 1113 0.3989 MMLAIEEVLCELSDHEKKNEQGLPPGFRFHPTDEELITFYLASKVFKNTCFNNLNFAEVDLNRCEPWELPEMAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVYSCGSRSLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLHSPHHFSTSSHTTTCKEEWVICRIFHKSGEKRNSLLQIQGHLGANPNLTSQKTCLPPPPPLLATSFTQQLDQNDQLLSNSHNIFPLHSFQPSFPMMNHTTRNNNNPSSELLFKSQQNYTMKQTIPKTEATFYDQHQSSQSINDAINLRWIIDNSSNNNYQNSLFPVEMDGADDLIAFSGAATNAEFRDMSIINSRGGGGVGLDAPSPMGIDSWPHAQLV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0348 370 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 307 - -
Mal2g0348 370 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 13 307 - -
Mal2g0348 370 Gene3D NAC domain 32 183 IPR036093 GO:0003677|GO:0006355
Mal2g0348 370 Pfam No apical meristem (NAM) protein 24 151 IPR003441 GO:0003677|GO:0006355
Mal2g0348 370 ProSiteProfiles NAC domain profile. 23 178 IPR003441 GO:0003677|GO:0006355
Mal2g0348 370 SUPERFAMILY NAC domain 18 178 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0348 Mal-Chr2 3843881 3846161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0348 1 184 NAC Transcription Factor Family AT1G76420 74.457 2.33e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal2g0348 NAM 3.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0348 - - mtr:MTR_3g116070 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0348 2 3843881 3846161 Mal2g0348 2 3843881 3846161 ECH