Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0343 ATGTCGGGATCTAGATCCGACAATCAACCACAACCGAAACCACAAACTATTGGTATTAATTTTATTTCTGACGGCACTACTCTTTACAAGACAGTGCCAACAATTAATCATCCAATACCTCTAATTTCTCCAGCCTCTCCCCTGACTTTTGTCTCAACTGATACTTCCAAAAAGCGTAGAGGCAGACCCCGCGGTTCTCTTAACAAAAACCACTCTAAGAAAAGGGCTTATGGATCGGTGAGACCTTCACTTACGTCCCACATTCTCATGGTGAATGCCAAAGAGAATGTGTTAGAAAAGATTATGGCATTTTCCCAAAACCTCTCTGGAAATATAAGCATATTATCAGCAATTGGGGCCATATCCAAAGCAACAATTTGTGTAGCTGGTAACACAGTGACTCACGAGGGGAGATATGAGATCATATCCCTTAGTGGGTCTTTGTCCCTTGGTGGCTTAAATGTGACCTTGTCATCAGATGGTGGTGTATTTGGTGGTAGAGTTGTTGATGTTTTGATTGCTGCTTCCCCTATTCAGATAGTATTGGGGAGCTTCATTTCAGGGAGTCAAGAGGAAGTTGAGACTGGTCCAAAAGAGCCTCCTAAAGAAGTCCCAAGAAACACACCATCTTCAGATGGAATTAATATCCTAGTTTAA 657 0.4201 MSGSRSDNQPQPKPQTIGINFISDGTTLYKTVPTINHPIPLISPASPLTFVSTDTSKKRRGRPRGSLNKNHSKKRAYGSVRPSLTSHILMVNAKENVLEKIMAFSQNLSGNISILSAIGAISKATICVAGNTVTHEGRYEIISLSGSLSLGGLNVTLSSDGGVFGGRVVDVLIAASPIQIVLGSFISGSQEEVETGPKEPPKEVPRNTPSSDGINILV* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0343 218 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 190 - -
Mal2g0343 218 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 49 203 IPR039605 GO:0003680
Mal2g0343 218 MobiDBLite consensus disorder prediction 191 218 - -
Mal2g0343 218 MobiDBLite consensus disorder prediction 50 78 - -
Mal2g0343 218 ProSiteProfiles PPC domain profile profile. 80 207 IPR005175 -
Mal2g0343 218 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 185 IPR005175 -
Mal2g0343 218 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 49 203 - -
Mal2g0343 218 CDD DUF296 85 185 IPR005175 -
Mal2g0343 218 MobiDBLite consensus disorder prediction 62 76 - -
Mal2g0343 218 Gene3D - 85 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0343 Mal-Chr2 3814423 3817484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0343 42 204 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 45.055 1.28e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0343 - - mtr:MTR_3g116100 176.022