Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0337 ATGGAGGGTGGTGAGAGAGATATGGATCAAAATGGTTCTCTTCCTCAGGATCAAGAAATGGTTGATGCTAATGTCAATTCTACCCTCACTCCTCAACTTGAACAACAACCCATCACCCCAAAACCCAAAGTTAAGAATGTTACAGAAGTCAATCATCATAATAACAACAATAATGTGCTAAACACTGCTGCTGCTGCTGCTGGCGAGATGGCTGATTATGATGAAGCCGGTACGCCTATGGAGCGAGAAGCGTTTATGAAAGAGCTTGAGCATTTCTACAGATCGAGGTCCTTGGAATTTAAGCCTCCTAAGTTTTATCAAGTACCATTGAATTGCCTCAAGTTATGGAGAGCTGTTATCAGACTAGGGGGCTATGAAGTGGTAACTGCATCCAAGTTATGGCGGTCAGTAGGAGAGTCTTTCCATCCTCCTAAGACTTGCACTACAGTCTCATGGACGTTTAGAATCTTTTATGAGAAGGCACTTTTAGAGTATGAAAAGCATAAGAGAGAGATTGGGGAGCTACAACTCCCTGTTGGATCACTCCATCAACCTTCAAGTGTGGAAAAAGAGGCCTCTGTTTATCAGGCTCCAGGCTCGGGTAGGGCGCGGAGGGATGCGGCCGCACGTGCAATGCAAGGTTGGCATGCTCAGCGCCTTATGGGATACGGCGAGGTTGCTGAGTCAGCTGTTAAGGACAAGAACTTCAGTCCCACACCAAAACGTGAAAAGAACCTCAAAAATATCGGTGTGATCAACAAACAGAGAATACCATCTGGTATGGACCATGCCGACAAAGCTGCAAATATAGAAGGAGACAGGCAATTGGTCACAGCAATAGTGGACCTTGGACCCCCAGCTGACTGGGTGAAGATCAATGTGCGGGAAACGAAGGACTGTTTTGAAGTGTATGCTCTAGTTCCCGGGCTCCTTCGTGAAGAGGTACGAGTCCAATCCGATCCAGTTGGACGACTTGTTATAACTGGTATGCCAGAAAATGTTGACAATCCATGGGGTATTACCCCCTTCAAAAAGGTTGTGAATCTACCTGCAAGAATTGATCCGCTCCAGACATCTGCTGTTGTTAGTTTGCATGGTCGACTATTTGTACGTGTTCCTTTTGAGCAGGGCGCTGTATGA 1140 0.4614 MEGGERDMDQNGSLPQDQEMVDANVNSTLTPQLEQQPITPKPKVKNVTEVNHHNNNNNVLNTAAAAAGEMADYDEAGTPMEREAFMKELEHFYRSRSLEFKPPKFYQVPLNCLKLWRAVIRLGGYEVVTASKLWRSVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGSLHQPSSVEKEASVYQAPGSGRARRDAAARAMQGWHAQRLMGYGEVAESAVKDKNFSPTPKREKNLKNIGVINKQRIPSGMDHADKAANIEGDRQLVTAIVDLGPPADWVKINVRETKDCFEVYALVPGLLREEVRVQSDPVGRLVITGMPENVDNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0337 379 SMART ARID_2 76 166 - -
Mal2g0337 379 ProSiteProfiles ARID domain profile. 79 170 IPR001606 GO:0003677
Mal2g0337 379 CDD ACD_sHsps_p23-like 294 373 - -
Mal2g0337 379 CDD ARID 81 166 - -
Mal2g0337 379 Gene3D - 80 177 IPR036431 GO:0003677
Mal2g0337 379 Pfam Hsp20/alpha crystallin family 294 375 IPR002068 -
Mal2g0337 379 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 26 376 - -
Mal2g0337 379 Gene3D - 278 378 IPR008978 -
Mal2g0337 379 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 278 379 IPR002068 -
Mal2g0337 379 SUPERFAMILY ARID-like 74 176 IPR036431 GO:0003677
Mal2g0337 379 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 26 376 IPR045147 GO:0006357
Mal2g0337 379 Pfam ARID/BRIGHT DNA binding domain 81 166 IPR001606 GO:0003677
Mal2g0337 379 SUPERFAMILY HSP20-like chaperones 287 374 IPR008978 -
Mal2g0337 379 SMART bright_3 80 171 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0337 Mal-Chr2 3775275 3781148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0337 3 376 ARID Transcription Factor Family AT1G76510 63.830 1.63e-156 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal2g0337 ARID 6.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0337 - - gmx:100797486 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0337 2 3775275 3781148 Mal2g0337 2 3775275 3781148 ECH