Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0313 ATGTTGCACTGTTTGAATACTAATTTGGGGAATCTAGCTGCTGAAAGCTGCTCCTCCGACATAACAGTGTTGGAAAGACAAAGGGAAAGAATCAAGTGGCAACAACAACAACAAGGTTTCTTCAACGGTGCTATGTTCTCTTCTTCTCTGCAACAACATGTTGACAATTCTCAACAAGATTATTCTTCACTTGCTCATTTAGTGGCTCTTCAAATGCCAACTATTGATGTCACCTCTGCAATTTCAAGAACTTTCAGCTGTCCACCTCTTCTTGCAGACCCCAAACTCATTGACTCTTCTTCAATTGTCAAAGACAATTCTTCTAAGAAGAGAAAATCTGAAAAAATTCATCATAATCCTAAGCTCAAGGTTGTTGGTGAAAATGATAACAAAGACAAGAGGATCAAAGTAGGTGCTGAGGACGGTGAGTCCAAAATCACCAGCAACAACAACAAAGAAAATTGTGTAGCAGAAGATACTTCAAACTCAAAGGAAAATTCAAAAGTTTCTGATGTTCAAAAGACTGATTACATTCATGTTCGAGCACGTCGTGGCCAAGCCACTGATAGCCACAGCTTAGCTGAAAGAGTTAGAAGGGAAAAGATTAGTGAGAGAATGAAGTATTTGCAAGATTTAGTACCAGGATGCAACAAAATTACTGGAAAAGCTGGAATGCTTGATGAAATCATCAACTATGTTCAGTCTCTTCAAAAGCAAGTTGAGTTCTTGTCAATGAAATTAGCTACTGTGAATCCAAGGCTTGACTTCAATATTGATGATCTATTTGAGAAAGAGGTGTTTCCTACTTGTAATGCAAATGCAACTTTTCAAGCCGCCATGGGAATGTCATCAGAATTGAATAATAATAATAATAACAATCCTTATCTTCAGTACAATTCACCAAATCAATTTGTTCCTTATGGTGGATTAGATACTGGAATCAACCCTTCAGATATGGGACTTAGAAGGAGCATAAGTGCCCCTGTATCCATACCTGAAACTTTTATTGATTCTTCTTGTTTCTCTCAAATTCTACCTTCTACAACATGGGAAGGTGATTTCCAAAACCTTTACAACTTGAATTTTGATCAAGCAAGAGCAACAGCTTTCCCTTCTCAATCTCAGTTATTCACAGGTAGTTAA 1143 0.3745 MLHCLNTNLGNLAAESCSSDITVLERQRERIKWQQQQQGFFNGAMFSSSLQQHVDNSQQDYSSLAHLVALQMPTIDVTSAISRTFSCPPLLADPKLIDSSSIVKDNSSKKRKSEKIHHNPKLKVVGENDNKDKRIKVGAEDGESKITSNNNKENCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPTCNANATFQAAMGMSSELNNNNNNNPYLQYNSPNQFVPYGGLDTGINPSDMGLRRSISAPVSIPETFIDSSCFSQILPSTTWEGDFQNLYNLNFDQARATAFPSQSQLFTGS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0313 380 MobiDBLite consensus disorder prediction 143 168 - -
Mal2g0313 380 MobiDBLite consensus disorder prediction 128 171 - -
Mal2g0313 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 255 IPR036638 GO:0046983
Mal2g0313 380 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 70 366 IPR024097 GO:0006355
Mal2g0313 380 CDD bHLH_AtBPE_like 176 261 - -
Mal2g0313 380 SMART finulus 192 242 IPR011598 GO:0046983
Mal2g0313 380 Gene3D - 183 256 IPR036638 GO:0046983
Mal2g0313 380 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 70 366 - -
Mal2g0313 380 Pfam Helix-loop-helix DNA-binding domain 190 237 IPR011598 GO:0046983
Mal2g0313 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 236 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0313 Mal-Chr2 3517391 3519055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0313 20 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 39.665 6.58e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g0313 HLH 2.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0313 - - gmx:100798855 426.402