Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0279 ATGTCTTCATCTTCTTCTGATACTAATAATGGGTTAAAAAAAGGAAAATGGTCAAAAGAAGAGGATGAATTATTAAAAGCATATGTGACAAAATATGGAGAGAAAAACTGGAAAACAGTGTCAAAAAATGCAGGGCTCAATAGAGATGATAAGAGTTGTCGATTTAGATGTTTCCTGGAAGAACCGATAATGCCATCAAGAACTTTTGGAATGGAAGGAAAAAAAAAAAAACGTGAAAGGCGTGGCCTACAAGTTGATATTGATTTAAATGGTAATGGAGAAAGTAGTTTGGGTGGTTCCAGTAGCCAACAAGTTGATGATTTACAAGAAGAGGAATTTAATATACCTGAAGTGAAATTTGGGAAAGACAATTTGCATAGAAGATATCCATCAATTTATGATGAGAAAAATGAAAACAACTTCAGGTATAGCATTGGAACTTCTGGTATACCTATGGCAATGCAATCAAATCTGCCTCTACTCCCGCAGTATCCATATAAAAGTGGTTCATTGGAGTCTATGTTCTATACACCAAAGAATTTGGAAGGCTCAGATGTTGGTCGCGTGCGTTCCTCTACTACAAATTTGGTTGATGAAAAAGGGAAGAAGCCAATTTCTTTGGAGAACGATGTTGAAGCAAATCATGACAACTTAATGCATCTGGCGGATCTTTGGTTAGGCTTCAGTTCATTATACAATAAAGATGCTAGTCGCGTGCATTCCTCTACTACAAATTTAATTGATGAAAAAGGGAAGAAGCCAATTTCTTTGGAGAACAAAGTTGAAGCAAACCATGACTACTTAATGGATCCAAATGATTGGTTTGACGTCGGTTCATCTAAGACAAATTTGGTTGATGCCTTAGACAAAATTCTAATTGGAGAAGTCATAGATGGGGATCTTTTGTTTGACTTCAGTTCATTAGACAATGATGATGCTAGTCGTGTGCATTTGTCTAAGACAAATTTGGTTGATGAAAAAGGAAAAAAGCCAATTTCTTTTGAGAACGATGTTGAAGCAAACCCTGGTGACTTAATGGATTCGGATCTTTTGTTTGACATCAATGCATAG 1071 0.3604 MSSSSSDTNNGLKKGKWSKEEDELLKAYVTKYGEKNWKTVSKNAGLNRDDKSCRFRCFLEEPIMPSRTFGMEGKKKKRERRGLQVDIDLNGNGESSLGGSSSQQVDDLQEEEFNIPEVKFGKDNLHRRYPSIYDEKNENNFRYSIGTSGIPMAMQSNLPLLPQYPYKSGSLESMFYTPKNLEGSDVGRVRSSTTNLVDEKGKKPISLENDVEANHDNLMHLADLWLGFSSLYNKDASRVHSSTTNLIDEKGKKPISLENKVEANHDYLMDPNDWFDVGSSKTNLVDALDKILIGEVIDGDLLFDFSSLDNDDASRVHLSKTNLVDEKGKKPISFENDVEANPGDLMDSDLLFDINA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0279 356 ProSiteProfiles Myb-like domain profile. 9 56 IPR001005 -
Mal2g0279 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 56 IPR017930 -
Mal2g0279 356 SMART sant 13 63 IPR001005 -
Mal2g0279 356 MobiDBLite consensus disorder prediction 71 85 - -
Mal2g0279 356 SUPERFAMILY Homeodomain-like 9 57 IPR009057 -
Mal2g0279 356 CDD SANT 16 57 IPR001005 -
Mal2g0279 356 MobiDBLite consensus disorder prediction 71 102 - -
Mal2g0279 356 Pfam Myb-like DNA-binding domain 14 56 IPR001005 -
Mal2g0279 356 Gene3D - 5 58 - -
Mal2g0279 356 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 56 - -
Mal2g0279 356 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 2 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0279 Mal-Chr2 3268965 3270662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0279 1 56 MYB Transcription Factor Family AT4G21440 53.571 7.71e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g0279 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0279 K09422 - mtr:MTR_5g088610 183.726