Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0272 ATGGAGTTTGCAGTAGCAAAAGCTTTGAAACCGAGTTTAAGAAGCGAGTTTGTTTTTCAACAAACGCTCGGCGAGGAACTTTTTAGCTTCAACGCCAACACGGTGGTTACCGGTGAAGATTTCTCCGTCGACGACCTCCTTGACTTCTCTAACGGCGGCGATATTCTTCACCACGAACACAACGAAGAAGAAGAAAAAGATAGTTTATCTCCTTCTTCTCACTCACTCTCAGAAGATAACAACTCCAATTTCACCGACGCTTCCTATGATTCTTCCATTTTCTCAACCGAATTACTCGTTCCGGATGATGACGTGGCAGGCCTTGAATGGGTTTCTCACTTCGTAGATGATTCTCTTCCAGAGCTATCTCTTCTCTACCACCCGGTTCAAATTCAAACCAACACGTGTCCTCAACAACATCATGAAACTCAGCATGGAAAAACTTTTCGTTTTTCAAATGAAAAAATGAAAATTACAACTAAGACCAGAACCGTGAAGAATAGAAAACCAAACCCACGAATTTGGTCACTTAACTCAACCTTCGTTTTTCCGTCTGCGGTTTTCGGAGAGCCGCCAGCGAAGAAACAGAAGAAAAAGGCCCCGGCCCAAGCCCAAACCCAGGCCCACGTTGTTGGGGTTGAAGCCCAAGAAGAGGCCCATTTACAGCGACGGTGTAGTCATTGCCAGGTGCAGAAGACGCCGCAGTGGAGAACCGGTCCGATGGGAGCTAAAACCCTTTGTAACGCTTGTGGGGTTCGGTATAAATCCGGTCGGCTTTTTTCGGAGTATAGACCGGCTTGCAGTCCTACTTTCAGCAGTGAAATTCATTCTAATAGCCACCGCAAAGTGTTGGAGATGAGGAAGAGGAAAGGGATGGTTGGACCGGAACCCGGTTTATCGGCTCAGACCCAAATGGTTACCACTTGCTGA 930 0.4677 MEFAVAKALKPSLRSEFVFQQTLGEELFSFNANTVVTGEDFSVDDLLDFSNGGDILHHEHNEEEEKDSLSPSSHSLSEDNNSNFTDASYDSSIFSTELLVPDDDVAGLEWVSHFVDDSLPELSLLYHPVQIQTNTCPQQHHETQHGKTFRFSNEKMKITTKTRTVKNRKPNPRIWSLNSTFVFPSAVFGEPPAKKQKKKAPAQAQTQAHVVGVEAQEEAHLQRRCSHCQVQKTPQWRTGPMGAKTLCNACGVRYKSGRLFSEYRPACSPTFSSEIHSNSHRKVLEMRKRKGMVGPEPGLSAQTQMVTTC* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0272 309 Pfam GATA zinc finger 225 258 IPR000679 GO:0006355|GO:0043565
Mal2g0272 309 PANTHER GATA TRANSCRIPTION FACTOR 1 309 - -
Mal2g0272 309 SMART GATA_3 219 273 IPR000679 GO:0006355|GO:0043565
Mal2g0272 309 CDD ZnF_GATA 224 281 IPR000679 GO:0006355|GO:0043565
Mal2g0272 309 MobiDBLite consensus disorder prediction 60 82 - -
Mal2g0272 309 PANTHER GATA TRANSCRIPTION FACTOR 1 309 - -
Mal2g0272 309 ProSiteProfiles GATA-type zinc finger domain profile. 219 255 IPR000679 GO:0006355|GO:0043565
Mal2g0272 309 ProSitePatterns GATA-type zinc finger domain. 225 250 IPR000679 GO:0006355|GO:0043565
Mal2g0272 309 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 217 281 - -
Mal2g0272 309 PIRSF Txn_fac_GATA_plant 20 308 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mal2g0272 309 Gene3D - 215 291 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0272 Mal-Chr2 3207605 3208621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0272 40 290 C2C2-Gata Transcription Factor Family AT4G36240 43.028 9.95e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal2g0272 GATA 1.8e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0272 - - gmx:100780311 344.354