Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0266 ATGAATGCCGAAGAAGACGAAGCTACACCTCACCAACAACCATCCGATTCTCCGCCTCCGCCGCCGCTTAACCTCTCACTTAATGCCGACGGCGATATGAACGACGACCTTGAGGCCGTTATTGTAGGTGAGACCAGTGATGCCGCCGTAAACAACACGGAGGAGGTTGCTGTTGATGACGTGGCATCGGCCGAGGGTGGTGAAGGCGAAGTGCATGTCATGGAAACTGCTTCTTATGGGGATAGGGATGGTATGCAAGAAGAAGAAGAAGAAATTGTTGTGGAGGAGAAGAAGGGGAATGAAGGAACTGATGTTGATTTAGAGCCTGAGAATGTGGAACACGATGAAACTAATTTGATAATCCAAGAGGAAGAGGTTCAAGTTAGGGTTGACAACACAGATGAAGCTCCTCTGATGGGAGGAGAAGAAGAAGGAGAAGGCGGCAACGACGAGGACGATGAGAAGGAAGAAGAAGGAGAAGACAAAGAAGAAGATGAGAAGCAAGAAGAAGGAGAAGAGATTGAAGAAGAAGAAGAAGAAGAAGAACAGGAGCAAGAAGAAGAAGAAGAAGAAGAAGCTGAAGCTGATCCTGATGGTGAAGCTGATGTTGGTTTGGCAGAAGAAGATAAAGAGGCTGCTGATGAGATGGAGGTGGCGGAGGAGGAGCCGAGTCCGAGTGCGAGTGCAAGTGCTGGGAAAAGGAAGCGTGGGAATGGGAAGAATTCTAAGTCAAGTGGTAGAGTTCCTTCAAAGAAAAAGATGGAAGAGGACGTTTGTTTCATTTGCTTCGATGGGGGTGACCTTGTGCTTTGTGACCGAAGGGGTTGCCCCAAGGCTTACCACCCTTCTTGCGTTAGTCGCGATGAGGCCTTCTTCCAAACCAAGGGAAAGTGGAATTGTGGTTGGCATCTTTGCAGCAACTGTGAGAAGAATGCACACTACTTGTGCTATACATGTACATTCTCTTTGTGCAAGGGTTGCATCAAAGATGCTGTTATGTTATGTGTTAAGGGAAACAAGGGGTTTTGCGAGACATGCATGAGAACTGTAATGTTGATTGAACAGAATGAGGAGGGAAACAGCACGGCACAAATTGATTTTGATGACAAAAATAGCTGGGAATACCTCTTCAAGGATTACTATGTAGATCTAAAAGGAAAGCTATCTCTAACATTCAATGAACTCGCTAAAGCTAAAAACCCTTGGAAGGGATCTGGTAAGCTTCCTTCTAAAGAGGAATCGCCAGATGAACTTTTTGATGCTGCAAACGATAGAGGATCAGATTCAGATAGTTCTTATGAGAATGTAGATTTGAGTCGATCTAAAAAAAGAAAGTCTAAGAAACGGGCAAAGTCTCGTTCCAAAGAAGGGAAATCATATAGTGCGCCATCTACAGAAGAAAGCTCTGAGTGGGCTTCAAAGGAGCTTTTGGAGTTTGTTATGCACATGAGAAATGGAGATAAATCTATGTTGCCACAGTTTGATGTGCATGCTCTTTTGCTAGAATATATTAAAATAAATAAGCTTCGGGATCCTCGCCGAAAAAGTCAAATCGTTTGTGATGCGAGGCTTCAAAATTTGTTTGGTAAGCCAAGAGTTGGACATTTTGAAATGTTAAAACTTCTTGAATCCCATTTCCTTCTAAAAGAGGATTCACAGGCTGAAGATCTCCAGGGGAGTGTTGTTGATACTGAAGTTAGTCATTTGGAGGGTGATGGCAATGATGATACATATACTAAAGCTGGAAAAGATAAGAAACGTAAAAGTCGTAAAAAGGGTGATGAGAGAGGACTTCAATCAAATATTGATGAATATGCAGCCATTGATAATCATAATATTAGTTTAATTTATCTAAGACGCAACTTAGTGGAAGATCTACTTGAAGACACAGATAAGTTTCATGACAATGTTGTTGGTTCCTTTGTGAGAATAAGAATTTCTGGTAGTGGTCAAAAGCAAGACTTGTATAGGCTGGTTCAGGTTGTAGGTACATGCAAAACAGCAGAGCCATATAAAGTTGGTAAAAAGATGACAGATATCTTGCTAGAAATCTTAAATTTAAACAAGACAGAGATTGTATCAATGGATATCATCTCAAATCAGGAGTTTACAGAGGTGATTAAAGCTTTCCATGATATTTAG 2142 0.4202 MNAEEDEATPHQQPSDSPPPPPLNLSLNADGDMNDDLEAVIVGETSDAAVNNTEEVAVDDVASAEGGEGEVHVMETASYGDRDGMQEEEEEIVVEEKKGNEGTDVDLEPENVEHDETNLIIQEEEVQVRVDNTDEAPLMGGEEEGEGGNDEDDEKEEEGEDKEEDEKQEEGEEIEEEEEEEEQEQEEEEEEEAEADPDGEADVGLAEEDKEAADEMEVAEEEPSPSASASAGKRKRGNGKNSKSSGRVPSKKKMEEDVCFICFDGGDLVLCDRRGCPKAYHPSCVSRDEAFFQTKGKWNCGWHLCSNCEKNAHYLCYTCTFSLCKGCIKDAVMLCVKGNKGFCETCMRTVMLIEQNEEGNSTAQIDFDDKNSWEYLFKDYYVDLKGKLSLTFNELAKAKNPWKGSGKLPSKEESPDELFDAANDRGSDSDSSYENVDLSRSKKRKSKKRAKSRSKEGKSYSAPSTEESSEWASKELLEFVMHMRNGDKSMLPQFDVHALLLEYIKINKLRDPRRKSQIVCDARLQNLFGKPRVGHFEMLKLLESHFLLKEDSQAEDLQGSVVDTEVSHLEGDGNDDTYTKAGKDKKRKSRKKGDERGLQSNIDEYAAIDNHNISLIYLRRNLVEDLLEDTDKFHDNVVGSFVRIRISGSGQKQDLYRLVQVVGTCKTAEPYKVGKKMTDILLEILNLNKTEIVSMDIISNQEFTEVIKAFHDI* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0266 713 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19 74 705 - -
Mal2g0266 713 SMART rtf1 607 709 IPR004343 GO:0003677
Mal2g0266 713 ProSiteProfiles Zinc finger PHD-type profile. 256 322 IPR019787 -
Mal2g0266 713 MobiDBLite consensus disorder prediction 95 249 - -
Mal2g0266 713 SUPERFAMILY SWIB/MDM2 domain 467 547 IPR036885 -
Mal2g0266 713 MobiDBLite consensus disorder prediction 137 221 - -
Mal2g0266 713 ProSiteProfiles SWIB/MDM2 domain profile. 465 548 IPR003121 -
Mal2g0266 713 SUPERFAMILY FYVE/PHD zinc finger 246 303 IPR011011 -
Mal2g0266 713 SMART swib_2 480 551 IPR019835 -
Mal2g0266 713 CDD PHD5_NSD 258 303 - -
Mal2g0266 713 Gene3D - 609 706 IPR036128 GO:0003677
Mal2g0266 713 MobiDBLite consensus disorder prediction 568 583 - -
Mal2g0266 713 ProSiteProfiles Plus3 domain profile. 607 713 IPR004343 GO:0003677
Mal2g0266 713 Coils Coil 160 196 - -
Mal2g0266 713 CDD SWIB-MDM2_like 471 546 - -
Mal2g0266 713 Gene3D SWIB/MDM2 domain 458 556 IPR036885 -
Mal2g0266 713 SUPERFAMILY Plus3-like 608 705 IPR036128 GO:0003677
Mal2g0266 713 PANTHER UNCHARACTERIZED 74 705 - -
Mal2g0266 713 SMART PHD_3 258 304 IPR001965 -
Mal2g0266 713 MobiDBLite consensus disorder prediction 568 596 - -
Mal2g0266 713 Pfam Plus-3 domain 612 705 IPR004343 GO:0003677
Mal2g0266 713 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 351 IPR013083 -
Mal2g0266 713 MobiDBLite consensus disorder prediction 95 131 - -
Mal2g0266 713 Pfam SWIB/MDM2 domain 473 546 IPR003121 -
Mal2g0266 713 ProSitePatterns Zinc finger PHD-type signature. 259 319 IPR019786 -
Mal2g0266 713 MobiDBLite consensus disorder prediction 400 466 - -
Mal2g0266 713 MobiDBLite consensus disorder prediction 409 424 - -
Mal2g0266 713 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0266 Mal-Chr2 3127908 3135352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0266 256 336 PHD Transcription Factor Family AT5G36670 36.905 2.63e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-BAF60b Mal2g0266 Plus-3 2.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0266 - - mtr:MTR_3g117490 907.901