Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0248 ATGGTGCTGCTTGTTCATCGTGTATATCCTCCTGCTTCACTGAAGTTGATTTTGTTAATTACAACTCTCTTCACTTTATCAGATTGCTATGACCCTTTGGATCCAAATGGGAACATTTCTGTAACATTTGACATTTACCAACGTATGGAAAATGGATATCTGGCAAGGGTGACTCTTGAAAACTATCATCAATATCGGCATGTAGACAAACCAGGGTGGAAACTAGGATGGACATGGACTAACAATGAGGTGATATGGTCAATGAGTGGTGCCATTGCAACTGATAGAGGTGATTGTTCATCTTACAGTGGTTCTCAGATGCCACATTCATGTAAGAAAGATCCCATCATAGTTGATATAGCTCCAGATGTGTCACAAAACAGATCAGACCATTGTTGTCGTGGTGGTCGCCTCTCTGCCCGTGCTGTTGATTCTTTCAATTCATTCTCTTCGTTCGAACTTGAAGTAAGAAACATGGAGGAAAAAGAAAATTCACTTGGAAAAGCACCTAATAATGTTACATTCATGGCCCCAGGTCCTGGTTACACTTGTAGCCCATTTATGACCACTGATCCCTCGGTGTCCTTAGATTTTGGAGGACAGAGACAAGTTCCAGTTCTCAGAACTTGGAAGTCAACATGTACATACTCAAGTTTCTTAGCAAACAAGTCACCGGTATGCTGTGTTTCTTTCTCAACATTTTACAATCCTATCATCACACCATGCCGTAATTGCACTTGTGGTGGATGCAGGGAAGCAAATAAAAATACACTGTCTTGCATAAGACCAGGTGATCCTTTGCGAGGGTCAAATGATGAGAAAAATATAATTGAATGCACTGACCACATGTGTCCAATTCGAGTGCATTGGCATTTCAAGAACAATTATATGAATCAATGGAGGGTGAAGCTTACAATTTCTAACTACAACTTCAATAGAAACTACTCTAATTGGAACATCCTGGTTCAACATCCTGGTTTCAACCAAAAAGCAACAACTTACAGCTTCAACAGCACTAAACTTTCGACTCTTGGGATCCAAGATGGAGTTGCTCTTTTCTGGGGGATAGAATATTACAACAGTGAATTATTGCATTCTGATAAGGATAGAGTGGGTTCTGTGACAACAGAAATACTATTGGAAAAAGATGAGAATACCTTCACATTGCAAAACGGATGGGCATTCCCAAGAAGAATATATTTCAACGGTGAAAACTGTGACATGCCTTTACCGGACACATTTCCTATGTTACCAAATGGTAGCTCAAGTTTAAGACCAACTAGTCTTGTTTGTACTCTTTCATTAATTTATTTGTTACTTGTCCAATTAGTACTGCTGTAG 1341 0.3952 MVLLVHRVYPPASLKLILLITTLFTLSDCYDPLDPNGNISVTFDIYQRMENGYLARVTLENYHQYRHVDKPGWKLGWTWTNNEVIWSMSGAIATDRGDCSSYSGSQMPHSCKKDPIIVDIAPDVSQNRSDHCCRGGRLSARAVDSFNSFSSFELEVRNMEEKENSLGKAPNNVTFMAPGPGYTCSPFMTTDPSVSLDFGGQRQVPVLRTWKSTCTYSSFLANKSPVCCVSFSTFYNPIITPCRNCTCGGCREANKNTLSCIRPGDPLRGSNDEKNIIECTDHMCPIRVHWHFKNNYMNQWRVKLTISNYNFNRNYSNWNILVQHPGFNQKATTYSFNSTKLSTLGIQDGVALFWGIEYYNSELLHSDKDRVGSVTTEILLEKDENTFTLQNGWAFPRRIYFNGENCDMPLPDTFPMLPNGSSSLRPTSLVCTLSLIYLLLVQLVLL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0248 446 PIRSF COBRA 1 446 IPR006918 GO:0010215|GO:0031225
Mal2g0248 446 PANTHER PROTEIN COBRA 16 440 IPR006918 GO:0010215|GO:0031225
Mal2g0248 446 Pfam COBRA-like protein 53 217 IPR006918 GO:0010215|GO:0031225
Mal2g0248 446 PANTHER COBRA-LIKE PROTEIN 16 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0248 Mal-Chr2 2963450 2965938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0248 28 443 COBRA Gene Family AT3G29810 45.843 1.76e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0248 - - ccaj:109801855 702.205