Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0240 ATGGAAGGGTTGACGAGTAATTGGTCATTGGAGCATGTTTTGAGAAATTTAAGTATAGAAAGTAAAGTTGTTAAGAAACTGATTCAAACAATCTCACTCTCCGATGACGAAACCGATTACTCTCCAAAGATTGCAATTATCCTTCGAACCCTAGAAGACGAACTTTTGTTGAGAGCATCTATCCCTGAATGGATGCTCGAACTTCTTGAGGTACTCGAAAAACTTCTTCTACTTCATTATTGCGGTTCAAACCCTATCACCAACGCCATGAAATCCGCTTATTGTGCCATTGCGGTTGAATGTACTCTCAAATACTTGGAACTGAAAACAACTCCAAACCCTTCCTACTCCAAAGCTGTGGACAGAATTTGGAGAGTTAGGGTTGGAAATATGGAGGAGGAGGAGGAGGAGGAACCCTCTTCCTCTTCTGCTGGTGAGACTAGTTTTTTGCTCTCTCATCACTTGAAAATCTGGAACACTCAGATTCAGGCTTCCTTGTTAGACTCTGGAGTCATGGAAAAGCTTTCTTCCATCCCTAACAATAGAAGGGAAGCCATTCAGAAACTGAAACTGTTTTTGGAGGAAACATGGCAAAACCTAGCTCCTTCTTTTCTTGAATCTCTTGCACATGAGGAGGAGGAGGAGGAGAATCAACTGGGCGTGGGTGTGACTGTGACCGTGAGTGATTCACATGTGAATGAAAAAGATAAAGAGTCTCCAATAGAGGTCGAGAAATACAATGACATGCTTAGAGGCAACTCTACTACTGTTGCTGAGGAATTGGCTACTTCAACCAGTTGTAGCAAAATTAACTCTTTGCCCATTAGCGAGGTCCCAATGAATGGGGAATATCGTAAATGCAATTCTGTGGAGTTAGAAACCTTGGCGAAGGATCCTATGCCTGACATTGTAAGATCTGATTTGGCAATTGAAGACACGAATCATGAGCCGCAAATGGGAAACCAGAGTACATATGCAAATGTACCCAACCCACAACTTTGCCAAAGGATGAATGATAATGAGGTCAATCTTAACAAGACAAATTCCCGTCCTAGTGATGTTCGTCATCATCCTAGCTGGATGAATCCAAATAGTTCTGCTCGTACTCATGAGGGGGAAACATCAAGGAGCACAAGGAGAATTAGGTTGCGTACTCCAAATTGGAAGAAGATTTCTCCATTGAAGGAGTATGAACCAAAACCCATCAGGAAAAGGAGAAGAAAATGGAGTAAACTTGAAGAGGAGAATCTAAGGACTGGAGTTAAAGTAATTGGAGAAGGAAAATGGAAATTAATCCGACGTTCTTATACATTTGACAAGAGAACTGAAGTTGATTTGAAAGACAAGTGGAGAAATCTGACGCAGTATGGAAACCAATGA 1380 0.4152 MEGLTSNWSLEHVLRNLSIESKVVKKLIQTISLSDDETDYSPKIAIILRTLEDELLLRASIPEWMLELLEVLEKLLLLHYCGSNPITNAMKSAYCAIAVECTLKYLELKTTPNPSYSKAVDRIWRVRVGNMEEEEEEEPSSSSAGETSFLLSHHLKIWNTQIQASLLDSGVMEKLSSIPNNRREAIQKLKLFLEETWQNLAPSFLESLAHEEEEEENQLGVGVTVTVSDSHVNEKDKESPIEVEKYNDMLRGNSTTVAEELATSTSCSKINSLPISEVPMNGEYRKCNSVELETLAKDPMPDIVRSDLAIEDTNHEPQMGNQSTYANVPNPQLCQRMNDNEVNLNKTNSRPSDVRHHPSWMNPNSSARTHEGETSRSTRRIRLRTPNWKKISPLKEYEPKPIRKRRRKWSKLEEENLRTGVKVIGEGKWKLIRRSYTFDKRTEVDLKDKWRNLTQYGNQ* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0240 459 Pfam Myb-like DNA-binding domain 406 453 IPR001005 -
Mal2g0240 459 PANTHER MYB TRANSCRIPTION FACTOR 5 456 - -
Mal2g0240 459 Gene3D - 397 456 - -
Mal2g0240 459 MobiDBLite consensus disorder prediction 345 371 - -
Mal2g0240 459 ProSiteProfiles Myb-like domain profile. 401 454 IPR001005 -
Mal2g0240 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 403 453 IPR017930 -
Mal2g0240 459 SUPERFAMILY Homeodomain-like 403 454 IPR009057 -
Mal2g0240 459 SMART sant 405 456 IPR001005 -
Mal2g0240 459 CDD SANT_TRF 407 454 - -
Mal2g0240 459 MobiDBLite consensus disorder prediction 345 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0240 Mal-Chr2 2891904 2894329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0240 86 453 Single Myb Histone (SMH) Gene Family AT1G15720 27.273 4.27e-21 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal2g0240 Myb_DNA-binding 4.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0240 - K11111 mtr:MTR_3g116690 379.022