LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g0233	ATGAGAATGAAAGGGAGATGTGTTTTGGTGGGAATTAGAATTGATGATAGCCATAGCAGACAACTCCTCAACTGGGCTATAGTCAAAGTTGCTCAACCTGGTGATTCTGTTATTGCAATCCATGTTGTTACAACTCCAGATCATGTTTCTGAAAGCAAGGCCTTGGTAGATGATTATTTAGAGGTTTATGAAGGGTTGTGCAGTGCAAAAAAGGTAGGTCTCTCAGGTCATATCTTGACAGGAAGATCTATTCGAAATATTCTCATTAGAGAGGCAAAAAACTGCGCTGCTATTGCTCTAGTGGTAGGGGGTGGAGCTTCAACGGCTAAATATTGCGCGAAGCGAGTCCCAGGCAGCACCAATGTTATCGGTATTCAGGGTGCAAGAATTGTGTTCCAAAGGTGCACAGATAATAAACAACTAATAGGTGGCGTTATAGAGGATCCTAGACCGAGTCTTATCAGCACGGTGGTCCAGTCCGCATTTGGCACTAACCACTCGGAGAATGAGAATGAGAAATCAAGAAGCCAAGAAGATAACAAAAAATGGGAGGAAGAAACATTTAAAGAAGAGATGAAAGTTCCATCAAGATTATCAACATCGCAGAAGCTCGGTTGGCCACTTCTCCGCAGGATGCATACAGAAATTTCAAGGGACATGTCTGTTGTGCAATGGGTAATGAACTTACCAGATCGCTCGCCACACAATAATAATAATAATAATACACACAATTCATCTCAAATTGAGGGCCAGAGCTATAAAAATGTTATTAGTTTCAGTAGCTGCAAGTGGTTTATCTTTGAGGTTCTCGACTCTTGCACTTGTCAATTCTCTTCAGAAAATGTGATTGGAATTGGAGGGAGTAATCGTGTGTACAGAGGAACCCTCCCTGATGGGAAGCCTGTGGCAGTCAAAGTCATGCAGTCATCAAAAGAAGCTTTCAAAGATTTTGCACTTGAAGTTGAAATAATGTCTTCATTGAACCACTCAAGAATCGCCCCTCTGCTTGGTATTTGCATTAGGGATGAGACTTTGATATCTGTTTATGATTATTTCCCACAAGGAACTTTAGACCAAAATCTACTACACGGTAAGAACAAGGATGGATCTATGTTGACATGGGAAGAGAGATTTAAGGTAGCTGTTGGGATTGGTGAAGCACTGAATTACCTGCACAAGCACACCCAAACCTCCAAGCCTATTATACATAGAGACGTCAAGTCTTCCAACATTCTTCTTTCCCACGGATTTGAGCCACATTTATCTGATTTTGGACTTGCCATGTGGGGACCAACAACTTCATCTTTTGCGATACAAGACGATGTAGTTGGAACCTTTGGTTATCTTGCACCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTTTATGCCTTTGGTGTAGTGCTACTTGAACTTATATCAGGGAGAGAACCAATTCACTCCAAAACTTGTAAAGGACACGAGATCAGTTTGGTCACATGGGCAAAACCAATTTTAGAGAGCAGGGAGGATATTAAAAGCTTATTGGATCCAAAGTTGGAAGAGAAGTTTGATGTAGCTCAAATGAAGAAAATGGTTCTTGCAGCATCCCTATGCACTATGCGGGCTGCGCGGCTTCGTCCTACTATGAATCAGATACTGAAGATCTTAAAAGGATGTGACGATGAGAAAGTTGAAAACATGTTTGAATCTCAGGAGAGTGATCATGATCATTCAGAAAATATTGATGATGAAGTATATCCAAATTCAAGTGCAGAGTTGCACCTTAGCCTTGCATTACTTGATGTTGACAATGATACTGCATCATCATCATATAGTAGTATTGAGAACAGCAATAATGAACATTTAAAAGAACAATGGAGCAGATCTTCTAGTTTCAATTAG	1893	0.4057	MRMKGRCVLVGIRIDDSHSRQLLNWAIVKVAQPGDSVIAIHVVTTPDHVSESKALVDDYLEVYEGLCSAKKVGLSGHILTGRSIRNILIREAKNCAAIALVVGGGASTAKYCAKRVPGSTNVIGIQGARIVFQRCTDNKQLIGGVIEDPRPSLISTVVQSAFGTNHSENENEKSRSQEDNKKWEEETFKEEMKVPSRLSTSQKLGWPLLRRMHTEISRDMSVVQWVMNLPDRSPHNNNNNNTHNSSQIEGQSYKNVISFSSCKWFIFEVLDSCTCQFSSENVIGIGGSNRVYRGTLPDGKPVAVKVMQSSKEAFKDFALEVEIMSSLNHSRIAPLLGICIRDETLISVYDYFPQGTLDQNLLHGKNKDGSMLTWEERFKVAVGIGEALNYLHKHTQTSKPIIHRDVKSSNILLSHGFEPHLSDFGLAMWGPTTSSFAIQDDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPIHSKTCKGHEISLVTWAKPILESREDIKSLLDPKLEEKFDVAQMKKMVLAASLCTMRAARLRPTMNQILKILKGCDDEKVENMFESQESDHDHSENIDDEVYPNSSAELHLSLALLDVDNDTASSSYSSIENSNNEHLKEQWSRSSSFN*	631

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mal2g0233	630	SUPERFAMILY	Protein kinase-like (PK-like)	256	553	IPR011009	-
Mal2g0233	630	MobiDBLite	consensus disorder prediction	162	182	-	-
Mal2g0233	630	PANTHER	OS01G0253100 PROTEIN	5	623	IPR045271	GO:0004714\|GO:0006468
Mal2g0233	630	SMART	serkin_6	277	552	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mal2g0233	630	Coils	Coil	166	186	-	-
Mal2g0233	630	Pfam	Protein kinase domain	278	551	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mal2g0233	630	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	8	117	-	-
Mal2g0233	630	PANTHER	PROTEIN KINASE SUPERFAMILY PROTEIN	5	623	-	-
Mal2g0233	630	MobiDBLite	consensus disorder prediction	168	182	-	-
Mal2g0233	630	Gene3D	Phosphorylase Kinase; domain 1	236	351	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g0233	Mal-Chr2	2810961	2813869	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g0233	264	553	Trihelix Transcription Factor Family	AT5G38560	41.695	7.85e-66	226

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Mal2g0233		Pkinase	7.2e-38	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g0233	-		-	mtr:MTR_3g117850	1092.41

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