LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g0224	ATGTCGAAAGAAGAAGGTCACCAAGCACTTCCTCACGGTAAGGACTACGTAGACCCACCACCAGCACCCCTCCTCGACTTCGCTGAGATTAAGCTCTGGTCTTTCTACAGAGCTCTCATTGCTGAGTTCATTGCCACACTCCTTTTCCTCTACGTCACCGTCGCCACCGTCATTGGTCACAAGAAACAAACCGGACCATGCGACGGTGTTGGCCTTCTAGGCATAGCATGGTCCTTCGGTGGCATGATCTTTGTTCTTGTCTACTGCACCGCCGGTATCTCCGGTGGCCACATCAACCCTGCGGTCACATTCGGGCTCTTCTTGGCTCGTAAGGTGTCTCTCATAAGAGCGGTTTTATACATAGTAGCACAGTGTTTGGGTGCTATTTGTGGTGTTGGGTTGGTGAAAGCTTTCATGAAACATCCTTACAATAACCTCGGTGGCGGTGCTAACTCTGTGGCTTCTGGTTACAGCAAAGGCTCTGCACTCGGTGCTGAAATTATCGGTACTTTTGTGCTGGTCTACACCGTTTTCTCTGCCACTGACCCAAAGAGAAGCGCACGTGACTCGCATGTCCCTGTTTTGGCTCCTTTGCCCATTGGTTTTGCTGTTTTCATGGTTCACCTTGCAACAATACCAATCACCGGAACAGGAATCAACCCTGCAAGGAGCTTCGGTGCTGCTGTTATCTTCAACAATGCCAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGACCGTTTGTGGGAGCGTTGGCAGCGGCTGCATACCATCAATACATACTGAGAGCGGCGGCTATCAAAGCGTTGGGCTCCTTCAGAAGCAACCCCACCAACTAA	840	0.5071	MSKEEGHQALPHGKDYVDPPPAPLLDFAEIKLWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIVAQCLGAICGVGLVKAFMKHPYNNLGGGANSVASGYSKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNAKVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN*	280

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g0224	279	PANTHER	AQUAPORIN OR AQUAGLYCEROPORIN RELATED	3	278	IPR034294	-
	Mal2g0224	279	PANTHER	BNAC03G65520D PROTEIN	3	278	-	-
	Mal2g0224	279	Pfam	Major intrinsic protein	30	257	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mal2g0224	279	ProSitePatterns	MIP family signature.	97	105	IPR022357	-
	Mal2g0224	279	Gene3D	Glycerol uptake facilitator protein.	22	279	IPR023271	-
	Mal2g0224	279	SUPERFAMILY	Aquaporin-like	29	263	IPR023271	-
	Mal2g0224	279	TIGRFAM	MIP: MIP family channel proteins	41	257	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mal2g0224	279	CDD	MIP	37	261	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mal2g0224	279	PRINTS	Major intrinsic protein family signature	79	103	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Mal2g0224	279	PRINTS	Major intrinsic protein family signature	201	223	IPR000425	GO:0015267\|GO:0016020\|GO:0055085

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g0224	Mal-Chr2	2750309	2751249	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g0224	1	279	Major Intrinsic Protein MIP	AT4G35100	88.571	0.0	505

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g0224	K09872		-	thj:104819653	527.324

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