Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0214 ATGGAGGGGCAAAACTGTCAAAATTTAAATATAGAATTAAATCCGCAAAACGGTGAATTCCTTATCTTGTTGAAAATTGAAAGAAGAGACACAGAGAGGAGAAGCAAAATGGTGGTGGTTGCACAAGGTGTTTGTGGAAAAGCGTTGCCGTTTAGCATCGGAGTTGGAGTGAGACCCAAAAAAGCCACTACTACACACTCTGTGTTTTTTGTTTCTTCGAATTCGAATTCCACCACCGCCGATGATAGCCGAGGCACAACCAGTGAAGCAAAACCATCCTCATCGAGTTTCAGAAGACTAAAAGTTGAGAAAGTGAAGGCTCTCATCCACAGAACAACCACAAGACGCCAACAACAACAACAACAACAACAACAACTAGATGACGACGACGACGACGACGACAATTCTGCATCTGCAACAAGACGACGACGTTCTGGATGGGGAGATAATAGGGTTACTCAGATTCAGTCGCAAACATCGGAGGACACCAACTTTTTCAGTCTGAAATCCTTTAAAGACATTGGATGCTCTGATTTTATCATTCAATCCCTTCATAACCTCTCTTTAACCCGTCCTTCCCATATACAGGCCATGTCATTTTCTCCTGTTATTGCCGGAAAGTCTTGTATCATTGCTGACCAAAGCGGTTCTGGAAAGACATTAGCTTATCTTCTACCAATCATTCAACGTCTCAGACAACAAGAACTACATCAGGGAGGACATCGTAAATCCTCTTCACAGTCTCCTACTCTTCTTATACTCGCACCCACTTCTGAGTTAGCTTCTCAGGTCTTACATAATTGTCGATCCATCTCTAAATCTGGGGTTCCATTCAAATCTATGCTTGTCACTGGTGGCTTCCGCCAAAAAACTCAACTCGATACTTTAAACCAGGGTGTTGATGTCTTAATAGCCACCCCTGGTCGTTTTCTCTTCCTCATCAAGGAAGGCTTCTTGCACTTAACAAATCTAACATGTGCTGTGTTGGATGAGGTAGATATACTCTTTGGTGATGAGGACTTCGAAAAGGCTCTTCAATGCTTGATTAGTTCTTCACCGGTTGACACACAATATTTATTTGTGACTGCAACTTTGCCAAAAAATGTTTACAGCAAACTGGTTGAAGTTTTTCCTGATTGTGAAATGGTTATGGGACCCAGTATGCATCGAATAAGCTCTCGCCTTGAAGAGATTATAGTAGATTGCAGTGGGGAAGATGGACAAGAAAAAACTCTCGACACAGCATTTTTGAACAAGAAAGCTGCTCTTCTGCAGCTTGCGGAGGAGAACCGTGTCCCAAGAACTATTGTGTTCTGTAACAAAATTGAAACATGCAGGAAAGTTGAAAATGCATTAAATCGTTTTGATAGAAAAGGAATTCGCATGCAAGTTCTACCTTTCCATGCTGCCATGACACAAGAATCACGGCTTGCTAGTATGAAAGAATTTACACGTTCTCCATCAAAAGAAGTGTCCCAATTTATGGTTTGCACTGACAGAGCATCACGGGGAATTGACTTCACTAGAGTGGATCATGTAATACTTTTTGACTACCCACGTGATCCAAGCGAATATGTACGGCGTGTTGGAAGAACGGCAAGAGGTGCCAAGGGACAGGGGAAGGCATTTATCTTTGTAGTTGGCAAGCAAGTATCCCTTGCACGCAAAATAATGGAAAGAAATCGTAAGGGACATCCGCTGCATGATGTACCTTCGGCTTATGAGTATTGA 1731 0.4235 MEGQNCQNLNIELNPQNGEFLILLKIERRDTERRSKMVVVAQGVCGKALPFSIGVGVRPKKATTTHSVFFVSSNSNSTTADDSRGTTSEAKPSSSSFRRLKVEKVKALIHRTTTRRQQQQQQQQQLDDDDDDDDNSASATRRRRSGWGDNRVTQIQSQTSEDTNFFSLKSFKDIGCSDFIIQSLHNLSLTRPSHIQAMSFSPVIAGKSCIIADQSGSGKTLAYLLPIIQRLRQQELHQGGHRKSSSQSPTLLILAPTSELASQVLHNCRSISKSGVPFKSMLVTGGFRQKTQLDTLNQGVDVLIATPGRFLFLIKEGFLHLTNLTCAVLDEVDILFGDEDFEKALQCLISSSPVDTQYLFVTATLPKNVYSKLVEVFPDCEMVMGPSMHRISSRLEEIIVDCSGEDGQEKTLDTAFLNKKAALLQLAEENRVPRTIVFCNKIETCRKVENALNRFDRKGIRMQVLPFHAAMTQESRLASMKEFTRSPSKEVSQFMVCTDRASRGIDFTRVDHVILFDYPRDPSEYVRRVGRTARGAKGQGKAFIFVVGKQVSLARKIMERNRKGHPLHDVPSAYEY* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0214 576 MobiDBLite consensus disorder prediction 73 97 - -
Mal2g0214 576 Gene3D - 389 569 IPR027417 -
Mal2g0214 576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 547 IPR027417 -
Mal2g0214 576 SMART ultradead3 188 398 IPR014001 -
Mal2g0214 576 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 200 383 IPR014001 -
Mal2g0214 576 Pfam Helicase conserved C-terminal domain 419 535 IPR001650 -
Mal2g0214 576 MobiDBLite consensus disorder prediction 111 154 - -
Mal2g0214 576 CDD SF2_C_DEAD 395 546 - -
Mal2g0214 576 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 169 197 IPR014014 GO:0003724
Mal2g0214 576 Pfam DEAD/DEAH box helicase 194 369 IPR011545 GO:0003676|GO:0005524
Mal2g0214 576 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 418 576 IPR001650 -
Mal2g0214 576 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 76 575 - -
Mal2g0214 576 MobiDBLite consensus disorder prediction 73 95 - -
Mal2g0214 576 Gene3D - 108 383 IPR027417 -
Mal2g0214 576 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 76 575 - -
Mal2g0214 576 SMART helicmild6 446 536 IPR001650 -
Mal2g0214 576 CDD DEADc 180 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0214 Mal-Chr2 2665725 2669311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0214 168 557 Eukaryotic Initiation Factors Gene Family AT3G19760 26.923 6.87e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0214 K13179 - gmx:100780849 711.449