Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0184 ATGCAATTAGCTTCAAACAGTGACGAGGAAGACTGTTCAGAACGCGAACCCATCTTGAATCACCAAGCGTCCACGGATTCCTCCTTTTCCTGTGAAATTATTCCTGCCAGCAGTGATGATATAGAGAATGTCCGCATTGACGAGTCTTCTCATCTTGTAAATGCAGATCAGTCACAATGCCGAATATGCCTTGATCTTGGAGGGGAAGACTTAATTGCCCCCTGCCATTGCAAAGGTACGCAAAAGCATGTCCACAGATCATGTCTGGATAACTGGAGGTCTACCAAGGAGGGCTTTGCTTTTTCTCACTGTACAGAGTGCAGAGCTGTTTTCATTTTACGAGCAAATGTCCCAAAAGATCGGTGGTGGTTGAGGTTGAAATTTCAGTTCCTTGTTGCCAGAGATCATGCATTCATTTTCATCATTGTTCAACTGGTTGTTGCTTTCTTGGGAGTGCTTATTTATAAATTCTATGGAGATGAACTTAGAGAAATGTTTGGTTATGAAGAACATCCATATGGATTTTATACAATGGCTGTTCTCGCCATTATTTTGGTGGGTTTGCTCTATGGCTTCTTTATAGCAATAATATGTGGCCAAAGAATCAATGAACGCCATTACCATGTTCTTGCCAAACAAGAATTGACAAAGGAATATGTGGTAGAAGATCGAGAACATGTAAAGAATGTGCCTGAACTCGACCCCAGCCATGTGACAGAACTAAGGATGTTGGGGCTTTACTAG 744 0.4194 MQLASNSDEEDCSEREPILNHQASTDSSFSCEIIPASSDDIENVRIDESSHLVNADQSQCRICLDLGGEDLIAPCHCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPKDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLIYKFYGDELREMFGYEEHPYGFYTMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0184 247 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 246 - -
Mal2g0184 247 PANTHER OS02G0132300 PROTEIN 2 246 - -
Mal2g0184 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 112 IPR013083 -
Mal2g0184 247 SUPERFAMILY RING/U-box 55 111 - -
Mal2g0184 247 SMART ringv_2 59 108 IPR011016 GO:0008270
Mal2g0184 247 CDD RING_CH-C4HC3_MARCH 60 108 - -
Mal2g0184 247 Pfam RING-variant domain 60 107 IPR011016 GO:0008270
Mal2g0184 247 ProSiteProfiles Zinc finger RING-CH-type profile. 52 114 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0184 Mal-Chr2 2176650 2179189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0184 1 206 C3H Transcription Factor Family AT1G50440 61.574 1.50e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0184 - - gmx:100789593 466.463