Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0180 ATGGCGTCCAAACAAGAAACTGAAATAATATTCAAGTCGAAACTTCCAGACATATACATCCCCAACCACCTTCCCCTCCATTCTTATTGCTTTGAGAATCTCTCCCAATTTGGTTCACGTCCATGTCTCATCAATGCTCCCACCGGAAAGGTTTACACCTACTACGACGTTGAACTCACCGCTCGTAAAGTTGCATCCGGTCTCAACAAATTGGGAGTCCAACAAGGTGATGTGCTCATGATCCTTCTCCCCAATTCCCCTGAATTCGTATTCTCCTTTCTTGGCGCTTCTTATCTCGGTGCCATAGCCACCGCAGCCAATCCTTTTTTCACGGCTGCAGAGATTGGAAAGCAAGCAAAAGCATCCAACGCCAAGTTGATCATAACACAATCATGTTACTACGACAAAGTGAAAGAGTTGTTGAATGATCATAAGTTTGTATTGGTAGATTCTACCGCCGCAGATGATAATGATCATGTGCATTATTATTTCTCAACGCTGATGAATGCAGACGAGAATGAAGTTCCTGATACAAAGATCCACCCTGATGATGTGGTGGCGCTGCCATATTCATCAGGAACAACAGGTCTACCAAAAGGGGTGATGTTAACACACAAAGGGTTGGTGAGTAGCATAGCACAGCAAGTAGATGGAGAGAATCCAAATCTATATTACAGCAATGAAGATGTGATACTTTGTGTACTTCCTCTGTTTCATATTTACTCACTCAACTCTGTTTTGCTCTGTGGACTCAGAGCCAAAGCTACAATTCTCTTGATGCCTAAATTCGACATAAATTTATTCTTGAGTCTTGTTAACAAATATGGAGTCACGGTTGCACCGGTTGTTCCTCCGATTGTATTGGCAATTGCAAAATCACCAGATCTTAATAAGTATGATCTATCTTCAATTAGAATATTGAAATCAGGGGGTGCACCACTTGGCAAAGAACTTGAAGACACTGTTAGGACAAAATTCCCCAACGCCATTCTTGGACAGGGATACGGAATGACTGAGGCAGGGCCAGTGTTAACCATGAGCTTAGCATTTGCTAAAGAACCAGTAAATGTAAAAGCAGGTGCATGTGGAACCGTTGTAAGAAATGCAGAGATGAAAATCGTGGATCCTGAAACTGGCAATTCTTTACCTCGAAACCAACCCGGTGAAATCTGCATAAGAGGCAACCAGATCATGAAAGGTTATCTAAATGATCGAGAGGCAACAGAGAGAACCATAGACAAAGAAGGTTGGTTGTATACAGGTGATATTGGGTATATTGATGAAGACGATGAGTTATTCATTGTTGATAGATTGAAGGAATTGATCAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAAGCTCTTCTTCTCTCTCATCCCAAAATCTCTGATGCTGCTGTTGTTCCAATGAAGGATGAAGCGGCTGGAGAGGTACCTGTTGCATTTGTCGTGAGATCCAATGGTTACACTGACTTAACCGATGATGAAATTAAGCAGTTTATCTCCAAAGAGGTGGTGTTTTACAAAAGAATAAATCGAGTATTCTTCATTGACGCAATTCCCAAGTCACCATCAGGCAAAATCTTGCGTAAGGATCTAAGAGCAAAATTAGCAGCTGGTGTTCCAAATTGA 1638 0.4164 MASKQETEIIFKSKLPDIYIPNHLPLHSYCFENLSQFGSRPCLINAPTGKVYTYYDVELTARKVASGLNKLGVQQGDVLMILLPNSPEFVFSFLGASYLGAIATAANPFFTAAEIGKQAKASNAKLIITQSCYYDKVKELLNDHKFVLVDSTAADDNDHVHYYFSTLMNADENEVPDTKIHPDDVVALPYSSGTTGLPKGVMLTHKGLVSSIAQQVDGENPNLYYSNEDVILCVLPLFHIYSLNSVLLCGLRAKATILLMPKFDINLFLSLVNKYGVTVAPVVPPIVLAIAKSPDLNKYDLSSIRILKSGGAPLGKELEDTVRTKFPNAILGQGYGMTEAGPVLTMSLAFAKEPVNVKAGACGTVVRNAEMKIVDPETGNSLPRNQPGEICIRGNQIMKGYLNDREATERTIDKEGWLYTGDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGYTDLTDDEIKQFISKEVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGVPN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0180 545 CDD 4CL 20 535 - -
Mal2g0180 545 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 5 540 - -
Mal2g0180 545 Pfam AMP-binding enzyme C-terminal domain 453 529 IPR025110 -
Mal2g0180 545 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Mal2g0180 545 Gene3D - 2 438 IPR042099 -
Mal2g0180 545 SUPERFAMILY Acetyl-CoA synthetase-like 14 541 - -
Mal2g0180 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 540 - -
Mal2g0180 545 Pfam AMP-binding enzyme 32 444 IPR000873 -
Mal2g0180 545 Gene3D - 439 541 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0180 Mal-Chr2 2095839 2101498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0180 2 507 Monolignol Biosynthesis Gene Families AT1G51680 69.455 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0180 K01904 - gmx:547944 868.611