Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0173 ATGGTCCTTATGGACTCTGAGGGAGGTAGGATTCATGCCACAATTAGGAGAACACTGCTTTATAAGTTTCAAAAGGAAGTTACCGAAGGGAAAGTCTATGTTTTTGAAAATTTTGATGTTGCTGCCAATGGTGGCAATTATAGAACTACTAGACATGGATACAAGCTAAATTTTCAAATCGGTACTAAGATTTTTGAACTTTCACCTGGTGCTGTACGTGAGCCACCTTTCAAGTTTGTACCAATTCCTGAGATCTATGGTGGGACATATGATTCGGATTACTTAGTTGACGTTGTTGGTATGCTGACTGGTGTGGGTACAGAACGTCAATATGAGAGAAATGTCAAAACTACGAAGCTAAATGTTATCGCTCTTGAGGCCGATGGCCATAAACTTAAGTGCACTCTATTTGGAAATTATGTAGATGACTTAAACTCTTTCTTGGCATCTGGTGATACTCTTAATACTGTAGTTGTTGTGCAACTTGGGAAGGTCAAGACCTTCCAAGATAAGTTGCACATTCAAAATTGTGTTGATTGTACCAAGATCATTTTTAATCCTACATGTGCTGAAGCTATTGAACTGAGAAACAGAATGCTTGGTAATGATGAGTCACCCTCATCTTTAACACTGTCACAAATTGCTGCTCAGCAACCAATAGATCCATTGCAGGAATTTATGTTCAACACTCCAAGATATTCCATTAAGGGTCGTGTAATGGATGACACCGGAAGCGCCATCTTTGTTCTTTTTGATCGTGATGCAACATTGTTGTTTAACAAATCTTGTGCTGAGATGGATGGAGCTGGAGGTGTGCCTGATGAGATTTATGGCTTGATTAACTCTACATATTTATTCAAGGTTGAATGTAAAGCTGTTTTTAGCCCTAGGTTTGAGAGGTCTTTTAGAGTGAAAAAAATATGCAATGATGTTGTCATTATCAAGAGTTTTAAGGACAAGTGGGCAAAAGAGGAGGCATTGTTCCTAAAAAATGCAAATGAAATGACCTCTTTGAGTGGTTTGTTGGAAAATGGTTTGAAGGGAAAAGCTGTTTGTGAAACAAATATTCTCTCCGAGGATATTGTAATCTCAAGTGCAATGCCATCTAAGGGGAAGGAAAAAGTTACTGACAATGTCAAACTAAGTGTATCACAGGACTTACTCCCTAAGTTTGAAGATGTTATTGTGGACCTTGAGCAAGATTCAACCCCTGTAGCACATATCTTAGTTGTGACTCACTTTGTTAGTGGTGCTATGGATGGAGCTAAAACCAGAAGCAAAATAGATAAAGAAGTTGAAGCTCTAAAAGTAATCACTTTGTGA 1323 0.3832 MVLMDSEGGRIHATIRRTLLYKFQKEVTEGKVYVFENFDVAANGGNYRTTRHGYKLNFQIGTKIFELSPGAVREPPFKFVPIPEIYGGTYDSDYLVDVVGMLTGVGTERQYERNVKTTKLNVIALEADGHKLKCTLFGNYVDDLNSFLASGDTLNTVVVVQLGKVKTFQDKLHIQNCVDCTKIIFNPTCAEAIELRNRMLGNDESPSSLTLSQIAAQQPIDPLQEFMFNTPRYSIKGRVMDDTGSAIFVLFDRDATLLFNKSCAEMDGAGGVPDEIYGLINSTYLFKVECKAVFSPRFERSFRVKKICNDVVIIKSFKDKWAKEEALFLKNANEMTSLSGLLENGLKGKAVCETNILSEDIVISSAMPSKGKEKVTDNVKLSVSQDLLPKFEDVIVDLEQDSTPVAHILVVTHFVSGAMDGAKTRSKIDKEVEALKVITL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0173 440 Gene3D - 72 207 IPR012340 -
Mal2g0173 440 SUPERFAMILY Nucleic acid-binding proteins 77 199 IPR012340 -
Mal2g0173 440 CDD RPA1_DBD_B_like 97 199 - -
Mal2g0173 440 Pfam Domain of unknown function DUF223 1 95 IPR003871 -
Mal2g0173 440 Gene3D - 1 66 IPR012340 -
Mal2g0173 440 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 1 265 - -
Mal2g0173 440 SUPERFAMILY Nucleic acid-binding proteins 230 312 IPR012340 -
Mal2g0173 440 PANTHER REPLICATION FACTOR A 1, RFA1 1 265 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal2g0173 440 CDD RPA1_DBD_A_like 1 64 - -
Mal2g0173 440 SUPERFAMILY Nucleic acid-binding proteins 1 67 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0173 Mal-Chr2 2015106 2019755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0173 3 213 Core DNA Replication Machinery Family AT2G06510 24.545 1.67e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0173 - - mtr:MTR_4g036240 325.479