Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0170 ATGTGTGGTGGTGCAATTATCTCCGACTTCATCTCAACTGCGGCGGTGGTCGGTGGTTCCCGCCGTGTCACCGCCGACATGTTGTGGCCCAATTTCACGAAACCCACGTCGAGGAAACCATTTTTCCTTGACGATGATTTCGAGGCTGAGTTCAGAGAGTTTGAGGATGATTCTGATTTCGATGAAGACGATGACGAGGATGATAAGGAAAGGTTGTTGGTCGGTGTCAAAGGATTTACCTTTGCTACAACTAACAAAAAATCCTCTGTTCGTGGATCAAGTGCTGCAAAGTCTGTTGCATCGAAATCAAACGAGCAAGGTGAAAAGGAATTGAAGAGAAAGAGGAAGAATCAGTATAGGGGTATCCGCCAACGTCCATGGGGAAAATGGGCCGCTGAGATCCGTGACCCAAGTAAAGGAGTTCGTGTTTGGCTCGGAACTTTCAACACTGCTGAAGAAGCTGCAAGAGCTTACGATGCCGAAGCTAGGAGAATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCCGAAGAGGCTCCTAATGCTTCTTCAAAACGTCTGAAGACAAATCCTCCTGGGACACAGCTGTTGAACAAAAATCTGAACTCTTTCAAGCCGAGCGGAAATTTCAGCGAAAATATGGAGAACTACTATTCCCATATGGATCAGGTGGAACAGAAAGCATCGGTTGACAACCAGTATGCTAACGTGGGAGCTTTTGCTGGAAACGGTGTTCAGTTTGCATCTGCTGATGTTAATGCTTATTTCAGTTCAGAGCATTCAAGCAATTCGTTTGATTATCCTGATCTATGTTGGGGCGAACAAGGCCCAAAAACACCTGAGATTTCGTCTGTGTTTTCTGCTCCTGCTCCTATTGAAGGCGAATCTCAGAAGAATCTGCTGTCTGGCAACTCTCAGGATATGCTACCTATGCAAAATGATTCTGAAAAGACAAACTCTGAGGAGCTTGCAGATATTGAATCCCTGCTGAAGTTCTTTGAGAACTCGTTTGATGATAACTGGAGCGATGCTTCATTGGCAGCTCTGCTTGATGGAGATACAACTCAGGATGGTGGAAATACAATGAACCTTTGGAGCTTTGATGACCTGCCTTCCATCGCAGGTGGAGTTTTCTGA 1134 0.4586 MCGGAIISDFISTAAVVGGSRRVTADMLWPNFTKPTSRKPFFLDDDFEAEFREFEDDSDFDEDDDEDDKERLLVGVKGFTFATTNKKSSVRGSSAAKSVASKSNEQGEKELKRKRKNQYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPNASSKRLKTNPPGTQLLNKNLNSFKPSGNFSENMENYYSHMDQVEQKASVDNQYANVGAFAGNGVQFASADVNAYFSSEHSSNSFDYPDLCWGEQGPKTPEISSVFSAPAPIEGESQKNLLSGNSQDMLPMQNDSEKTNSEELADIESLLKFFENSFDDNWSDASLAALLDGDTTQDGGNTMNLWSFDDLPSIAGGVF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0170 377 CDD AP2 118 176 IPR001471 GO:0003700|GO:0006355
Mal2g0170 377 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Mal2g0170 377 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Mal2g0170 377 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Mal2g0170 377 PANTHER DNA-BINDING DOMAIN 1 371 IPR044808 GO:0003700|GO:0009873
Mal2g0170 377 Gene3D AP2/ERF domain 117 176 IPR036955 GO:0003700|GO:0006355
Mal2g0170 377 SUPERFAMILY DNA-binding domain 118 176 IPR016177 GO:0003677
Mal2g0170 377 PANTHER EREBP TRANSCRIPTION FACTOR 1 371 - -
Mal2g0170 377 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Mal2g0170 377 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
Mal2g0170 377 MobiDBLite consensus disorder prediction 90 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0170 Mal-Chr2 2003314 2005314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0170 1 377 AP2-EREBP Transcription Factor Family AT1G53910 41.645 8.45e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g0170 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0170 K09286 - gmx:100818646 385.956