Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0162 ATGCCTTCAAGACAAATACCTTCTACAAGTTCCAATATTTTCACCAAACCCAAGTTTCTTTTCATAGCACTAACCATTTCAGCTTCTGTTGTCATCTTCTTTTCAATCCTTTACTTCCTTTACCATCTTTGGCATTCTCTTGTACATAGAGCTAAGACCATACCTTTTGATGCAAGTGCTCCTTTGAAGCTGCAAAGATTCTCTTACAAAGAGTTAAAGGTTGCTACCAATGGTTTTGACACTGCTAATATCATTGGCAAAGGTGGTTCTGGTACTGTTTTCAAGGGAGTACTTAAAGATGGAAAATTTATTGCTATCAAAAGGTTGGACTCATTGTCTTTGCAATCAGAGAGAGAGTTTCAGAATGAGTTGCAGATTCTTGGAGGGTTGAGATCACCTTTTTTGGTGACCCTTTTGGGCTATTGTGTTGAAAAGAATAAGAGAATTTTGGTTTATGAGTATATGCCTAATACAAGCTTGCAAGAGTCACTTTTTGGTGATGAGTGTTTTGGTTTAAGTTGGGAGAAAAGGTTTTGTATAATTATGGATGTTGCTAGAGCATTGGAGTTTTTGCACCTTGGATGTGATCCACCTGTGATTCATGGTGATATCAAGCCAAGTAATGTGTTGCTTGATGCCGAGTTTCGCGGGAAGATCTCTGACTTTGGTTTGTCAAGGATTAAGGTGGAGGGTGAATTTGGAGTTGACTTGTTTAGCCAGGATTTGGGGAAGAGCCAAGATCTTTGGAAGAGTCAAGACCTTTCAGGTAATTTGACTGCAGAAACACCTGTAATTGGCACTCCTGTTGAGAGTGTTAGTGAAGTTGATTTTGCTCTTGCTTTGCAAGCTTCTACTTCATCCAAAAATAGTAGGACTTGTTTAAATGTTAAAGCTTTGAACTTGAACTCTTTGAATTATAATGCCAATATTGTTGGTGAAAGTGAAAGTAAGAGTTTAAATTCAAAAGGTAAGGAAATTTCAAGTTTGGATATTGGAGGAGGAGGGGATGATTTTTGGAATAGTAATAAGTTTGTTCCTTATGATGATGAGTTTTGTAGCACTGATTATAGTAAGGAGTTGGCTGTTAATAATGCTTGTTTGGTTGATGAAGAGAAGGAAAATGGGAAACAGTGGGGAGAAGATTGGTGGTGGAGACAAGATGGAAGTGGTGAATTATGTAGTAAAGACTATGTCAAGGAATGGATTGGGAGTCAGATTTGTCCATCAAATGCTGATTGGGATGATGGTATTGGTAGTATGAAGAACAGTAACATTCATCAAGAGAAACCAGAATTGGAAAATTCAAGTCCAATTGATAAAGTCAGTGATGCAAATGGACCACAGTTACAGGTATCTGAGATGGAAAATGCAGAAAATGTGGTTGATACGAAAGAAATGAAGGGAAAGAAAAACCGCAAGAAGAAGAAGAATAGGAAGATGCAAGAGTGGTGGAAAGAAGAACATCTTGCTGAATTAAGCAAGAAAAAGTCCAATAAGCTGAAAACTCTTCAAACTAAATGGAAGAAAGGCTTGAAAGTACCACATTTTGGTTTAGGTAGAAGGTTCTATCTTTGCCAACGTAATAAGAACTATGGAGAGAAAGGACAGAATGAGTGTGAACAAAATGGTGAGTTTAGCTTCAGAAGAGGTTGGAGGAAAAAAAGCACGCGTTCGATTGGGAGTGATATGTGGAGTGGCGATCTTTTCAGCCGCGAACTCAGCAGCACAACTAGTATGAGAGGTACACTGTGTTATGTAGCACCAGAATATGGAGGGTGTGGATTCTTAATGGAGAAAGCTGATATATACAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCGGGTAGAAGACCATTACATGTTCTTGCATCTCCTATGAAGCTAGAAAAAGCTAACTTAATTAGCTGGTGTAGACACTTGGCTCAAGCTGGTGGTAGTAACATTTTGGAACTAGTTGATGAGAAATTAAAAGAAGATGATTACAATAAGGAACAAGCAAGTTTGTGTATCAACTTGGCACTCACTTGTTTACAGAAAATTCCAGAGTTGAGGCCAGATATTGGAGATATAGTTAAGATTTTGAAAGGGGAGATGGAGCTTCCACCACTTCCATTTGAGTTTTCGCCTTCTCCGCCTTCCAGATTATACAGCAGATCACGGAGAAAACAGAAGGGCAGTGCAGAAATATAG 2190 0.3845 MPSRQIPSTSSNIFTKPKFLFIALTISASVVIFFSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKELKVATNGFDTANIIGKGGSGTVFKGVLKDGKFIAIKRLDSLSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRILVYEYMPNTSLQESLFGDECFGLSWEKRFCIIMDVARALEFLHLGCDPPVIHGDIKPSNVLLDAEFRGKISDFGLSRIKVEGEFGVDLFSQDLGKSQDLWKSQDLSGNLTAETPVIGTPVESVSEVDFALALQASTSSKNSRTCLNVKALNLNSLNYNANIVGESESKSLNSKGKEISSLDIGGGGDDFWNSNKFVPYDDEFCSTDYSKELAVNNACLVDEEKENGKQWGEDWWWRQDGSGELCSKDYVKEWIGSQICPSNADWDDGIGSMKNSNIHQEKPELENSSPIDKVSDANGPQLQVSEMENAENVVDTKEMKGKKNRKKKKNRKMQEWWKEEHLAELSKKKSNKLKTLQTKWKKGLKVPHFGLGRRFYLCQRNKNYGEKGQNECEQNGEFSFRRGWRKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGGSNILELVDEKLKEDDYNKEQASLCINLALTCLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSRLYSRSRRKQKGSAEI* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0162 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mal2g0162 729 PANTHER OS08G0275200 PROTEIN 1 727 - -
Mal2g0162 729 MobiDBLite consensus disorder prediction 704 729 - -
Mal2g0162 729 SUPERFAMILY Protein kinase-like (PK-like) 59 714 IPR011009 -
Mal2g0162 729 MobiDBLite consensus disorder prediction 450 481 - -
Mal2g0162 729 Gene3D Transferase(Phosphotransferase) domain 1 511 700 - -
Mal2g0162 729 Gene3D Transferase(Phosphotransferase) domain 1 155 268 - -
Mal2g0162 729 ProSiteProfiles Protein kinase domain profile. 79 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0162 729 PANTHER OS07G0586332 PROTEIN 1 727 IPR044576 -
Mal2g0162 729 SMART serkin_6 79 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0162 729 Gene3D Phosphorylase Kinase; domain 1 46 154 - -
Mal2g0162 729 Pfam Protein kinase domain 81 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0162 729 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0162 Mal-Chr2 1872600 1874789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0162 559 694 Receptor kinase-like Gene Family AT3G58690 32.117 5.76e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mal2g0162 Pkinase 9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0162 - - ccaj:109812677 1131.32