Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0143 ATGGATCTTCTAAAATCAGAGCCATGTTCATCTAATAATTTGAACATCTCATTTTCTGAGAAGAAACAGACAGAAAATGAAGAGAAAAAACATCTTCTACTTGATTTAACTCTTCCTAGTAAACAAGAACTCAATCTCATAAACTGTTTCGATACAGAACAGTCCATGTCGATGAACTCATCATCGGAATCTAATCATGGTGGTAATGAATTAGAGCCAAGGGTTTTCTCATGCAACTACTGTCAAAGAAAGTTTTATAGTTCACAGGCACTTGGTGGACACCAAAATGCACACAAGAGAGAAAGAACTATGGCAAAAAGAGGACACAAAGCCGCAGTTTCGCTAGAATTTGAACACAGGTACTCAAGTATGGCTTCTCTACCTTTGCATGGATCCTATAACAGATCATCATCATCATCACTTGGAATTCAGGTGCATTCTTCTATGATTCACAAACCTTCTTATCAAACACCGTTTTTCGGTTTGTCGCGTTACTGTGGCCAAAACCAGTGGCAGAAGCTGCCTATGTATTCACAGCCAGCATCAAGGAATTTTCATGTTGAGGCAGAAACTGATGGATCATCATCCTTGGCTAATAGCATACCTACAAGATCAGGGAAATTTTCTCCAACAAAGGTGCAAAATGGATTTGGAGGTTACTTGTTGGGTAATAGTGCTACAAGTTTGAAGACTAAACAAGAGGAGTTGAAGAAGCTTGACTTGTCCCTCAAACTCTAA 738 0.3889 MDLLKSEPCSSNNLNISFSEKKQTENEEKKHLLLDLTLPSKQELNLINCFDTEQSMSMNSSSESNHGGNELEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTMAKRGHKAAVSLEFEHRYSSMASLPLHGSYNRSSSSSLGIQVHSSMIHKPSYQTPFFGLSRYCGQNQWQKLPMYSQPASRNFHVEAETDGSSSLANSIPTRSGKFSPTKVQNGFGGYLLGNSATSLKTKQEELKKLDLSLKL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0143 245 MobiDBLite consensus disorder prediction 189 210 - -
Mal2g0143 245 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Mal2g0143 245 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Mal2g0143 245 Gene3D Classic Zinc Finger 51 130 - -
Mal2g0143 245 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 30 245 IPR044246 GO:0009788
Mal2g0143 245 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 30 245 - -
Mal2g0143 245 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0143 Mal-Chr2 1605042 1605779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0143 40 245 C2H2 Transcription Factor Family AT5G25160 44.643 3.17e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g0143 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0143 - - gmx:102666245 231.491