Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0139 ATGAATCTTCTTGTTCTGTTCATTACCATTTATATTTCATCAACAATTCTTCATGCAAATGCTCAAGCTCAAGCTCAATCTCCAGGAAATGAGGTTAGAATAGTGCACCACCAGAGTTTGAATAAGAGAATTCTAGTAGCACTAATTGCTTGTTCTACTCTTCTTGCTGGAATCTTCCTGTTCTTATTGTATATTTTCTTCCGGCGGCATAAAAACTTAACAAGCTCCACTAGTAAAAGCCATGGAACCATAGAGGCTGCAAAAGGGGAAAAGGAAACCTTAAGCGCTGTTAGTGCTAAACTTAACTACTCAAGAATGGCTGATAAGAAGAGTTCAATTGCTATTTTCGACTTTCAATTGTTAGAGGCTGCAACAAACAACTTTTCCACAGATAATATCATGGGAGAGAGTGGTTCTAGAATTGTTTACAGAGCTCGTTTCGACGAACATTTGCAGGCTGCTGTGAAGAAAGCAGACAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAGTTTGTTGAGCAAGACTCGGCATCAGAATATCATAAAACTCCTAGGCTATTGTATTCATGGTGATTCAAGGTTTCTTGTTTATGAGTACATGGAGAGTGGTTCTCTGGAAGCTCAATTGCATGGGCCTACTCGTGGATCGTCTTTAACTTGGTATATCCGGTTAAGAATCGCAATTGATGTTGCTAGAGCATTAGAATATCTCCATGAACACTCCAATCCTCCTGTGGTTCATAGAGACTTAAAATCTTCGAATATTCTTCTGGATTCTCATTTTAATGCCAAGCTATCAGATTTTGGACTCGCTGTAGCTTCTGGCATGCAACACAAGAACATGAAGATGTCGGGAACTTTGGGATATGTGGCCCCAGAGTACATTTCACATGGTAAACTAACTGACAAAAGCGATGTCTATGCTTTTGGAGTTGTCCTTCTAGAATTACTTACTGGAAGAAAACCAATGGAGAACATGTCCTCAGACCAATATCAATCTCTGGTTTCATGGGCCATGCCTCAGCTAACTGACAGATCAAAGCTTCCAAGTATTCTAGATCCTGTTATCCAAAATACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTGCTATGTGTACAAGCAGAACCAAGTTATAGGCCACTTATAACAGATGTTCTGCACTCTCTCATCCCTCTGGTACCCCTAGAGCTTGGAGGGTCACTCAGAGTTACAGAACCAATCGGCTCGGAAAATCTTCAATGA 1257 0.4033 MNLLVLFITIYISSTILHANAQAQAQSPGNEVRIVHHQSLNKRILVALIACSTLLAGIFLFLLYIFFRRHKNLTSSTSKSHGTIEAAKGEKETLSAVSAKLNYSRMADKKSSIAIFDFQLLEAATNNFSTDNIMGESGSRIVYRARFDEHLQAAVKKADSDADREFENEVSLLSKTRHQNIIKLLGYCIHGDSRFLVYEYMESGSLEAQLHGPTRGSSLTWYIRLRIAIDVARALEYLHEHSNPPVVHRDLKSSNILLDSHFNAKLSDFGLAVASGMQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKPMENMSSDQYQSLVSWAMPQLTDRSKLPSILDPVIQNTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPLELGGSLRVTEPIGSENLQ* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0139 418 PANTHER RECEPTOR-LIKE KINASE 16 409 - -
Mal2g0139 418 SUPERFAMILY Protein kinase-like (PK-like) 106 394 IPR011009 -
Mal2g0139 418 SMART serkin_6 128 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0139 418 ProSiteProfiles Protein kinase domain profile. 128 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0139 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Mal2g0139 418 Gene3D Phosphorylase Kinase; domain 1 88 200 - -
Mal2g0139 418 PANTHER OS01G0253100 PROTEIN 16 409 IPR045271 GO:0004714|GO:0006468
Mal2g0139 418 Pfam Protein kinase domain 132 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g0139 418 Gene3D Transferase(Phosphotransferase) domain 1 201 399 - -
Mal2g0139 418 CDD STKc_IRAK 134 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0139 Mal-Chr2 1583699 1586759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0139 16 340 Receptor kinase-like Gene Family AT1G80640 46.526 2.20e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mal2g0139 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0139 - - gmx:100811188 664.07