Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0131 ATGTGCCACGAAGATGAAGAGTTCCTTCGTGACTTCATGGCACAGCCATCTTCTGTAGCAGCTGGAGCCGCCGCCGCTGCCACTAATGAGTTACCGGAGCTGCTTCCTCCATCCACGTCCTCTAGAGCTTGTTGCATTATCTCTATGGGTAACTCCACGACAATACCGTTACCAGCTATGATATCCAAATCCAAACCACCACGTTGTCCCACAAAAAAGAGGAGTTCCGAGAATCTAAACTTGGAACCAAAAGCAATTACAAAAAAAGGAGAAAAGAAGAAAAATAGAACTCTACATCATGCAATGGGAGAGAGGAAAAGGAGACTTGAACTTGCACACAAATTCGTAGAGCTTTCAACTATTATTCCCCGCGTGAAGAAGACAGACAAAGCTTCTATACTTGTAGGCACAATAAATTACGTGGAACAACTCCGAAAACGGGTGATGGGGTTAGAACAGCAAAACAAGAAAGGCAAAGAACCAATGACATTTCTCAATAGTGAAACGAATGTTGACAATTGTCTTAGACCAAAAGAATTGGTCCCTGATGTGAAAGTGAAAGTGTTGGAGAAGAATGTACTCATTTACATCAATTGTGAGAAGGAAAATGGCATTCAACTCAAAATATTGGACATGCTTCAAAATCTTCATTTGTTTGTTACCAGCACTAGCATATTGCCGTTTGGAAATTCAACTCTTGGCATTACTATCACCGCCAAGGTGCGCCTCACCATACTTTAA 741 0.4184 MCHEDEEFLRDFMAQPSSVAAGAAAAATNELPELLPPSTSSRACCIISMGNSTTIPLPAMISKSKPPRCPTKKRSSENLNLEPKAITKKGEKKKNRTLHHAMGERKRRLELAHKFVELSTIIPRVKKTDKASILVGTINYVEQLRKRVMGLEQQNKKGKEPMTFLNSETNVDNCLRPKELVPDVKVKVLEKNVLIYINCEKENGIQLKILDMLQNLHLFVTSTSILPFGNSTLGITITAKVRLTIL* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0131 246 Pfam Helix-loop-helix DNA-binding domain 98 144 IPR011598 GO:0046983
Mal2g0131 246 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 240 - -
Mal2g0131 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 168 IPR036638 GO:0046983
Mal2g0131 246 PANTHER BHLH TRANSCRIPTION FACTOR 1 240 - -
Mal2g0131 246 SMART finulus 101 150 IPR011598 GO:0046983
Mal2g0131 246 Gene3D - 87 160 IPR036638 GO:0046983
Mal2g0131 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 95 144 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0131 Mal-Chr2 1460729 1463892 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0131 100 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 32.692 1.76e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g0131 HLH 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0131 - - mtr:MTR_2g104530 263.848