Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0130 ATGGAGCAGTCATGGGAAAATTGGCCTCTTCATTCGGAATTGGGTGATGTAGACATTGTAGAGGATATGCAAGGGCAATATTGTCATCAAAGTAGTGCAGATGATGATGATGAAGAGTTCTTGAGAGACATAATCCTTCAGCAACCTCCTGTTACATATTCTGGAAGCAGTTTATCATCCTCTAATGAGATGGACGTAGCAGCTACTACACAAGAAGAAGAACCACAAAAGAAGAGTAGAAGCTGTGGAAAATCTAGTTTGCTTTTGTCGTCTAATAATAAGAAGAGTTTGGAACCAAAAGTTAAAGCGAGTCGTAGCAAAAGTGGAAAGAAGAGCAGAAGTGAATCTCAGTGTTTGGATCACATTATGGCAGAGAGAAAAAGGAGACTTGAACTATCACAGAAGTTCATTGCACTTTCAGCTACTATTCCTGACTTGAAGAAGACGGAGAAGACCTATGTAATTGGTGAAACAATCAATTATGTGAAACTACTTCAAGAACGTGTGAAGGAGTTAGAAGATCCAAACAAGAAAACTGATTTGTGTGTAAATGAAGATACCACCTCAAATTCTGATCAGGATTGCTGCAAATCATCATCACTCTCTGATGTTAAAGCAAGAGTATTGGAAAATGAGGAAGCACTCAAGGTTGTCTTTTGA 660 0.3864 MEQSWENWPLHSELGDVDIVEDMQGQYCHQSSADDDDEEFLRDIILQQPPVTYSGSSLSSSNEMDVAATTQEEEPQKKSRSCGKSSLLLSSNNKKSLEPKVKASRSKSGKKSRSESQCLDHIMAERKRRLELSQKFIALSATIPDLKKTEKTYVIGETINYVKLLQERVKELEDPNKKTDLCVNEDTTSNSDQDCCKSSSLSDVKARVLENEEALKVVF* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0130 219 Gene3D - 103 180 IPR036638 GO:0046983
Mal2g0130 219 Pfam Helix-loop-helix DNA-binding domain 119 166 IPR011598 GO:0046983
Mal2g0130 219 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 175 IPR036638 GO:0046983
Mal2g0130 219 MobiDBLite consensus disorder prediction 51 69 - -
Mal2g0130 219 MobiDBLite consensus disorder prediction 51 119 - -
Mal2g0130 219 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 212 - -
Mal2g0130 219 MobiDBLite consensus disorder prediction 98 119 - -
Mal2g0130 219 MobiDBLite consensus disorder prediction 81 97 - -
Mal2g0130 219 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 116 165 IPR011598 GO:0046983
Mal2g0130 219 PANTHER BHLH TRANSCRIPTION FACTOR 1 212 - -
Mal2g0130 219 SMART finulus 122 171 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0130 Mal-Chr2 1453000 1454889 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0130 19 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 31.720 1.09e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g0130 HLH 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0130 - - cam:101501528 152.525