Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0129 ATGGAGCAGTATTCGTGGGAAAATATTTGGCCTCTTGATAGGGAAATGGATATGGATTTGTTAGAATCGATGTGCTGCGAAAAGGATGAATTCCTTGGTGACTACATGGCAAAACAATCATCTATAGTAGCCGGAGCTGCCACCACCACCGCCACAGAGATTGCAGGAGAACTACTTCCAAGAACTTGCACTTTCTCTTTTGATAATTCCAAACCACCTTGTTACCCTAAAAAGAGGACTTCCTCAAATCTAAACTTGGAACCAAAAGCAATCATTGGCACAGAATTATTAGCTGGAGAAAAGAATAATACTATTAGATCAAGCAAATCTACTAAGACTCTATTTCACACAATGGCAGAGAGAAAAAGGAGACATGAACTGGCACTTAAATTCACGGAGCTTTCGGCTATAATTCCTCGCTCGAAGAAGAAAGACAAGACTTCTATAGTTCTAAGCACTATCAATTACGTGGAGAAACTCCAAAAGCGAGTGATGGAGTTAGAAGTACAGCAAAAGAAGAGAGGGAAAGAACCTATAATCCTAAATAACGCAAATCCGCATGCAATTATACACAATGAAATGCTCCCTGATGTCAAAGTCAAAGTGTTGGAGAAAGATATACTCATTTACATCATTTGTGAGAAGGAAAATGACATTCAACTCAAAATATTGGACATGCTTCAAAATCTTCATTTGTTTGTCACTAGCACCAGCGTATTAACGTTTGGCAATTCAACACTTGGCATTACTATCATCGCTCGGATGAGCGATGCATACAGAATGACGATGATGGATCTAGTGAATAACATAAGACAATTGCTAGTGAGTAGTGCAAATCATCGAAAATGA 849 0.3875 MEQYSWENIWPLDREMDMDLLESMCCEKDEFLGDYMAKQSSIVAGAATTTATEIAGELLPRTCTFSFDNSKPPCYPKKRTSSNLNLEPKAIIGTELLAGEKNNTIRSSKSTKTLFHTMAERKRRHELALKFTELSAIIPRSKKKDKTSIVLSTINYVEKLQKRVMELEVQQKKRGKEPIILNNANPHAIIHNEMLPDVKVKVLEKDILIYIICEKENDIQLKILDMLQNLHLFVTSTSVLTFGNSTLGITIIARMSDAYRMTMMDLVNNIRQLLVSSANHRK* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0129 282 SMART finulus 117 166 IPR011598 GO:0046983
Mal2g0129 282 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 280 - -
Mal2g0129 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 111 160 IPR011598 GO:0046983
Mal2g0129 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 108 176 IPR036638 GO:0046983
Mal2g0129 282 PANTHER BHLH TRANSCRIPTION FACTOR 5 280 - -
Mal2g0129 282 Gene3D - 102 176 IPR036638 GO:0046983
Mal2g0129 282 Pfam Helix-loop-helix DNA-binding domain 116 161 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0129 Mal-Chr2 1393642 1397735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0129 116 274 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.150 4.15e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g0129 HLH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0129 - - mtr:MTR_2g104530 323.553