Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0127 ATGGAAGAATATTTATGTCGCACCAACAACATATTTGATGAAGAGTTCCTCAGAGATATCATGGATCATACACCACAAGATCAATTCAGTGTCCCTATTGCCACAACTGGCCTAGTCAACAACAACTCATCCATCAATGTCTTCCATTCAACTCAATATGGTGCAGAAAATCCAACCAGCTCATTACCAATACCAACAACTTATAAACTGTCTTATGACAAATCTACTACATTGTTACCACCAACTGAACAACATCATGATTCTTTGCCTTTGTCATCATCAAAGGCTAACCAAGGGTCGAATTCGAAGAAGACTCGAGGCGCTTCTGAGACGCTAGATCACATAATATCAGAGAGGAACAGGAGACAGGAACTTACAAGAAAGTTCATAGAACTTTCAGCATTTCTACCTGGATTGAAGAAGATGGACAAGATTCATGTACTAAGAGAAGCTATCAAGTACGTGAAACAACTTGAAGAACGTGTAAAAGAACTAGAAGAAGACATCAAGAAGAAAGGTGCAGGATCAATGATCACCATAACAAGATCTCATCTCCTCATTGACAATGACTCTGCAATGGTTGAAATGAACCCTGAAGAATGCTATGGGCACAATGAATCACTTCCGGATGTTGAAGCGAGGGTTCTAGGGAAGGAAGTGTTAATCAAGATTCACTGTGGGAAGCAAAAGGGAATTGTGGTCAATATAATGTCTCAGCTTCAACTTCATCATCTCTCCATAACAACTACCAATGTCTTGCCATTTGGAAATACCCTTGACATCACCATTATTGCTCAGATGGGTGACAAATACAACTTGACATTGAAGAATCTACTGAAAAAACTAATAGTAGTGGCTACATTGAAGGCATGTGATGATGTCCAACAATGA 891 0.3928 MEEYLCRTNNIFDEEFLRDIMDHTPQDQFSVPIATTGLVNNNSSINVFHSTQYGAENPTSSLPIPTTYKLSYDKSTTLLPPTEQHHDSLPLSSSKANQGSNSKKTRGASETLDHIISERNRRQELTRKFIELSAFLPGLKKMDKIHVLREAIKYVKQLEERVKELEEDIKKKGAGSMITITRSHLLIDNDSAMVEMNPEECYGHNESLPDVEARVLGKEVLIKIHCGKQKGIVVNIMSQLQLHHLSITTTNVLPFGNTLDITIIAQMGDKYNLTLKNLLKKLIVVATLKACDDVQQ* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0127 296 Gene3D - 97 173 IPR036638 GO:0046983
Mal2g0127 296 MobiDBLite consensus disorder prediction 77 106 - -
Mal2g0127 296 Pfam Helix-loop-helix DNA-binding domain 114 159 IPR011598 GO:0046983
Mal2g0127 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 109 158 IPR011598 GO:0046983
Mal2g0127 296 Coils Coil 148 175 - -
Mal2g0127 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 174 IPR036638 GO:0046983
Mal2g0127 296 SMART finulus 115 164 IPR011598 GO:0046983
Mal2g0127 296 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 293 - -
Mal2g0127 296 MobiDBLite consensus disorder prediction 77 110 - -
Mal2g0127 296 PANTHER BHLH TRANSCRIPTION FACTOR 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0127 Mal-Chr2 1307143 1308631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0127 105 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.382 2.61e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g0127 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0127 - - mtr:MTR_8g069740 402.519