Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0126 ATGTGGAGTTCAAGCAGAGTTTCCGAGGAGGAACAAACTGAATCCTCTTCTTTCTCAACTTCTCTCTTCAATTTCTCTTCTGGAAACCCTAGAATCGAAGAAACTCGCGGCCTCATGCACGTCTTCCCTGAACAAACCCCTCCTTCTCTTCCGGTTGGACGGAAGCCATTGGCGTGTGTTGTGGGAGTACCAAATCACATGACATATGCGGATTTTTGTCAGTTTTGTGGTTCGTTTATTCAGCATATTCTTGAAATGCGCATTGTGAGAATGGAATCGATGGAAGATCGATACAGTGTTTTGATTCGCTTCGATCAACAAGATTCTACAGATGCTTTCTATACTCATTACAATGGTCGACGTTTTTCGTCTCTTGAGGTTGAGGTATGCCGTGTTGTTTTCACGTTAGATGTGCAGTATACTGGGTCAATTGAACATGCACAACCATCCAATACTACTTCAACTGAACAGCCTACTTGTCCAGTATGCCTTGAGCGATTAGATCAAGACACAAGTGGAATTCTTACAACCATATGCAATCATTCTTTCCATTGTTCCTGTATTTCAAAATGGGCAGATTCTTCTTGTCCTGTATGCCGCTATTGCCAACAGCAGGCTGAAAATTCTATATGTTTCGTTTGTCAAACCACTGAGAACCTTTGGATATGTGTTATATGTGGGTTTGTTGGCTGTGGAAGATATAAAGGAGGGCATGCCATAATACACTGGAAAGAGACGCAGCACTGCTATTCCTTGGAAGTGGAAACCAAGCGTGTCTGGGATTATGTGGGAGACAACTATGTTCATAGACTTATTCAGTCCAAAACTGATGGGAAGTTAGTTGAGCTGAACTCTCACTGTGTGCATGCAGACAGTGGATGTGGCAGCTGTGGAGATAATGCCATGAGAGAGGCTATACTTAATAGTAAAGTCGAAGCTATTGTCAATGAGTACAATGAATTGCTTGCTACTCAACTTGAAAACCAAAAATTGTATTTTGAATCCTTATTACAACAAGTAGAACAAGAAACGGAAGGGAAAATTTCCGTAGCTGTTCAGAAGGCTGTCAGTCTCAAACAGCACAAGATTCAGTCCAAGATAGATCGATGTAACAAAGAGAAGAAGTTTCTGGATGAGCTTAATGACAACCTTTTGAAAAATGAGGAGATCTGGAAAGCCAAGTTACTTGAGATTGAAGAGAGGGAGAAAAAAGCTTTAAAACTGTCTGATGATAAGATAACGCAACTGGAAAAGCAGCTTAGTGAGCTCATGGTTTGCCTTGAGGGTGGGAAGACAGTAGAACAGATGCCATTATCAAATGATGCAAATGGTGGAACTGTCTCTGACATTTCAAAAGTATCCTCTTCAACGTGTAGCTCTTAG 1383 0.4136 MWSSSRVSEEEQTESSSFSTSLFNFSSGNPRIEETRGLMHVFPEQTPPSLPVGRKPLACVVGVPNHMTYADFCQFCGSFIQHILEMRIVRMESMEDRYSVLIRFDQQDSTDAFYTHYNGRRFSSLEVEVCRVVFTLDVQYTGSIEHAQPSNTTSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYCQQQAENSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDYVGDNYVHRLIQSKTDGKLVELNSHCVHADSGCGSCGDNAMREAILNSKVEAIVNEYNELLATQLENQKLYFESLLQQVEQETEGKISVAVQKAVSLKQHKIQSKIDRCNKEKKFLDELNDNLLKNEEIWKAKLLEIEEREKKALKLSDDKITQLEKQLSELMVCLEGGKTVEQMPLSNDANGGTVSDISKVSSSTCSS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0126 460 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 202 IPR013083 -
Mal2g0126 460 ProSiteProfiles Zinc finger RING-type profile. 160 200 IPR001841 -
Mal2g0126 460 MobiDBLite consensus disorder prediction 437 460 - -
Mal2g0126 460 Pfam Ring finger domain 159 200 IPR001841 -
Mal2g0126 460 ProSiteProfiles Zinc finger UBP-type profile. 194 287 IPR001607 GO:0008270
Mal2g0126 460 SMART ring_2 160 199 IPR001841 -
Mal2g0126 460 Coils Coil 367 387 - -
Mal2g0126 460 Coils Coil 323 343 - -
Mal2g0126 460 CDD RING-H2_BRAP2 158 201 - -
Mal2g0126 460 Pfam Zn-finger in ubiquitin-hydrolases and other protein 211 270 IPR001607 GO:0008270
Mal2g0126 460 Pfam BRCA1-associated protein 2 51 147 IPR011422 -
Mal2g0126 460 CDD RRM_BRAP2_like 59 139 - -
Mal2g0126 460 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 281 IPR013083 -
Mal2g0126 460 PANTHER BRCA1-ASSOCIATED PROTEIN 7 454 - -
Mal2g0126 460 SUPERFAMILY RING/U-box 176 275 - -
Mal2g0126 460 SMART Zf_UBP_1 210 259 IPR001607 GO:0008270
Mal2g0126 460 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0126 Mal-Chr2 1302752 1306279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0126 156 200 C3H Transcription Factor Family AT1G72220 48.936 1.85e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0126 K10632 - gmx:100794688 768.459