Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0076 ATGGTACAATCAAAGAAGTTCAGAGGTGTCAGGCAACGCCACTGGGGCTCTTGGGTTTCTGAGATTCGTCATCCATTATTGAAAAGGAGGGTGTGGTTAGGAACATTTGAAACAGCTGAAGAAGCAGCTAAAGCATATGATGAAGCAGCAATTTTGATGAGTGGAAGAAATGCAAAAACTAACTTTCCAATTAATGTGGAAAATCAAACCAGTTCTATTTCATCTTCATCTTCAACTTCTTCCAAAGCATTTTCTGCAGTTCTTAGTGCAAAGTTAAGGAAGTGTTGCAAGTTTCCTTCACCTTCACTCACTTGCTTGAGGCTTGATGCAGAGAATTCACACATTGGTGTGTGGCAGAAAGGTGCAGGTCCTCGTTCTGAATCAAATTGGATTATGATGGTTGAGTTAGAAAGGAAAAAAAGTGATTCTGAGCCAGAGAAGGTAAAGCCAGAGGAATTAAGTAAAAATGGTTTGGATGATGAACAGAAAATTGCTTTGCAGATGATAGAAGAACTTCTCAATAGAAACTAA 531 0.3898 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPINVENQTSSISSSSSTSSKAFSAVLSAKLRKCCKFPSPSLTCLRLDAENSHIGVWQKGAGPRSESNWIMMVELERKKSDSEPEKVKPEELSKNGLDDEQKIALQMIEELLNRN* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0076 176 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 176 - -
Mal2g0076 176 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1-LIKE 1 176 - -
Mal2g0076 176 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Mal2g0076 176 MobiDBLite consensus disorder prediction 138 159 - -
Mal2g0076 176 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mal2g0076 176 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mal2g0076 176 Gene3D AP2/ERF domain 5 66 IPR036955 GO:0003700|GO:0006355
Mal2g0076 176 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Mal2g0076 176 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Mal2g0076 176 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Mal2g0076 176 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0076 Mal-Chr2 873108 873950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g0076 1 176 AP2-EREBP Transcription Factor Family AT1G15360 62.000 7.14e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g0076 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0076 - - gmx:100796962 260.381