Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6156 ATGGAGCGACATGGTGAGAATAAGAATAGTAGAATGATCGATCCAAGAAGTGGGTTTTGCAATTCCAATTCAATCTTCTACAGCAAAAGAAAACCCCTCCCACTCCCACCAAACCACTCTTTAGACGCCACCACTTTCATCTCCTCCCGCGCTCATCACGGCCACATAGCTTTCATCGATGCCTCCACCGGCCATCAATTCACCTACCAACAACTCTGGCAAGCTGTAGACTCCGTCACCTCCTCACTCTCCAATATGGGTATCCGTAAAGGTGACGTCATCCTCCTCCTCTCTCCCAACTCCATCTACTTCCCTATTGTCTGTCTCTCCGTCATGTCCCTCGGGGCCATCATCACCACCACTAATCCCCTCAACACCTCACGTGAAATCGCCAAACAGATCGCTGATTCCAAACCTGTTCTTGCTTTCACCACCCCTCAACTCGTTTCCAAAATCACCGATGCATCACCCTCACTTCCAATCATTCTCATGGACACCACATCAACAACAGCCACAACACTGGATGAAATGATGAAGAAAGAACCAGAGTTGAGTAGAGTGACTGAGCGCATCAACCAGGATGACACAGCCACACTACTCTACTCATCTGGAACAACAGGACCAAGCAAAGGAGTAGTATCTTCCCACAAGAATCTCATAGCGATGGTTCAAGTTGTAATGGCTAGGTTTGGTAAAGAACAAGAGACAAGAGAAACTTTCATATGCACTGTTCCGATGTTTCATATTTACGGTCTTGCAGTGTTTGCTATGGGGCTTCTAGCTATGGGTTCAACCATCGTTGTTCTCTCTAAATTCGAGATGAATGACATGCTTTCATCCATTCAAAAATTCAGAGCAACTTTCTTACCTCTTGTGCCGCCGATATTGGTTGCTATGCTGAACAACGCAGATGCTATTAAGAGCAAGTATGATTTGAGTTCACTTCATACGGTGGTTTCCGGTGGTGCTCCTTTGAGCAAAGAGGTTACGGAAGGGTTTATTGAAAAGTATCCGAATGTTAGCATATTTCAGGGTTATGGTCTCACTGAGTCTTCTGGAATTGGAGCTTCTACTGAGTCTTTGGAAGAGAGTCGTAAGTATGGCACGGCGGGACTTGTATCTGCTTCCACGGAGGCTATGATTGTTGACACTGAAACTGCTCTGCCGTTGCCGGTTAACCGGACCGGTGAGCTTTGGCTACGGGGTCCCACCATAATGAAAGGTTATTTCAGTAATGAGGAGGCAACTACATCAACCATTACTCCAGAGGGTTGGTTAAAAACAGGGGATGTTTGCTATATTGATAGCGATGGATTCTTATTTGTCGTCGATCGCTTGAAAGAGCTCATTAAGTACAAGGGATATCAGGTCCCTCCAGCAGAACTAGAGGCTTTGTTGCTTACTCATCCTGCTATATTAGATGTTGCTGTCATCCCGTATCCAGATAAGGAGGCTGGGCAGGTTCCAATGGCATATGTGGTAAGGAAGGCTGGAAGTAACTTATCAGGAAGCCAAGTTATGGATTTTGTTGCAGAGCAGGTGGCTCCGTACAAAAGAATTCGGAAAGTGGCATTCATATCTTCTATACCAAAAAATCCATCTGGTAAAATTCTTCGGAAGGATCTCATCAAGCTCGCTATGTCTAAACTCTGA 1653 0.4555 MERHGENKNSRMIDPRSGFCNSNSIFYSKRKPLPLPPNHSLDATTFISSRAHHGHIAFIDASTGHQFTYQQLWQAVDSVTSSLSNMGIRKGDVILLLSPNSIYFPIVCLSVMSLGAIITTTNPLNTSREIAKQIADSKPVLAFTTPQLVSKITDASPSLPIILMDTTSTTATTLDEMMKKEPELSRVTERINQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQVVMARFGKEQETRETFICTVPMFHIYGLAVFAMGLLAMGSTIVVLSKFEMNDMLSSIQKFRATFLPLVPPILVAMLNNADAIKSKYDLSSLHTVVSGGAPLSKEVTEGFIEKYPNVSIFQGYGLTESSGIGASTESLEESRKYGTAGLVSASTEAMIVDTETALPLPVNRTGELWLRGPTIMKGYFSNEEATTSTITPEGWLKTGDVCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDVAVIPYPDKEAGQVPMAYVVRKAGSNLSGSQVMDFVAEQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLAMSKL* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6156 550 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
Mal1g6156 550 Gene3D - 23 447 IPR042099 -
Mal1g6156 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 549 - -
Mal1g6156 550 Gene3D - 448 549 IPR045851 -
Mal1g6156 550 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Mal1g6156 550 Pfam AMP-binding enzyme 50 452 IPR000873 -
Mal1g6156 550 SUPERFAMILY Acetyl-CoA synthetase-like 48 547 - -
Mal1g6156 550 CDD 4CL 35 542 - -
Mal1g6156 550 PANTHER 4-COUMARATE--COA LIGASE-LIKE 3-RELATED 13 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6156 Mal-Chr1 140562955 140566007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6156 8 550 Monolignol Biosynthesis Gene Families AT1G20500 65.280 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6156 K10526 - gmx:100811344 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6156 1 140562955 140566007 Mal1g6156 1 140562955 140566007 ECH