Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6155 ATGGCGAGTGAGTCTTCTTCAAATGAAGCCGGGTCCAGTAATGTTTCTGAAGATTCAACTGTTCACCTCAATATCAAAACTCTTGATTCTAGAATCTACACTTTTCAAGTCGACAAAAATATGCCCGTTTCTCTGTTCAAAGAGAAAATTGCAAACGAAGTAGGTTTACCAGTTAATCAGCAACGCCTCATTTTTAGAGGAAAAGTCTTAAAGGACGAACACGTTCTTTCTGAGTATCATGTTGAGAATGGCCATACATTGCATTTAGTTGAAAGACAGCCAAATCAGACACAAACTTCTTCTGCTACGGCATCTGCTGAGACAACTGCTACAAATAATAATCGAGGAAACAATGTTGGACCAGGAGCTCCACGTAGCCGTGTTGGGCAGATTTCACACAGCTTGGTTCTTGGGACTATTAATGTGGGGGATCAGGGTGAAGGCATTTCTCAAGACATTACTCGGGTTATTGGGGCAGTTTTGAATTCTTTTGCAAATGGGGGCCAGGGCACAATGAATGCTCCTACTTCTGCACAAACTTCTTCGGCTCCACCGGGGAATGAAACCGTAGGAAATCAAGCTGGAAATCAGGCACCATCTGGACAGGCATTCCAACCGATGCCTCATGTTGTTCAGATTCCTATGGCTGCAGGAGCCATACCTGTTCCTTCTTTCAATGCACCAATTCCCCATTCACTCAACACGCTGTCTGTGTTCATAAATCGCATGGAACAGGCACTTTCTCAAAATGGTTATGGGCCAAATATATCTTCAACTAATCCTGGAGATCAACGAGTGGAATTGCCTTCCAATACACAAGGGTTGCCGACACTTGAAGCATTAACCACTGTATTGCATCGTGCTGAACAGTTGCTTAGTGGTCAAGCTGTTTCCGCTCTATCTCATATTGCAGGACGCATGGAGCGAGAGGGAACTTCTGCCGATCTAGGTATAAGAGGTCAAATACAGTCTGAGTCAGTACAAATAGGAATTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTAGGCCGAACTATGTTAACACTGCGAATGGGACAGTCTTCTGCAGAATCTGTTGTTAATGCTGGACCAGCAGTTTATATTTCTCCATCAGGGCCGAATCCTATAATGGTGCAGCCATTTCCACTTCAAACGAGCTCCCTGTTTGGCGGTCCACTTTCTTCTTCAACTCCTGCAACGTTAGGCACCGTTGGTGTTGGAAGTGCTCCTAGGAACGTAAACATTCACATACATGCTGGTGCCTCTCTTGCACCAATTGTTTCAGCAATTGGCTCTAGACCAAACAATGGGGAAGGGACAAGGACTGAACAACGTAGTGAGCCTGGTTCTGGTGATTCAGGTTCAACACGGGTTTTACCTGTTAGGAATGTCATATCAGCAACTCTCCCATCTAACCCTTCTGGCATCGGAGCTGCTGGCAGCACACCAACTGGATTTAGTATTTCCACTTCACAGCTACCACCTGATTCAGCTCCATTGTCATCTGTTTTAGCTGAAATCCAGTCGCGCCTTAGCAACTCTGTTGGTAATATGCAAGGAGACAACACAAGTTTGTCAGGCCAAATGCAATCGACTAGCAGGGACTTCTCTTCTGGATCTGAACCAAGACCTGCACAGGTAAATGAACAGAGAGATACCGTGGAGGTGAATGGATGTGGGGCTTCCGGTGTATCCTCAGTTGGTTGCACTTCTGAAAGTGGAGTAGAGAAGACCCAAACCGAGGCAATCAAAACCTGTAGTAATGACGAGAGAGATGTTTTGGTCGACAAATTTGTTTCAAATTCTTCCAATCAAGATATACAAAGTTGTTGTAGTGGAGAAGCAACGGTAAAATCAGAAGAAGTACAAGATGAAGTACAAGATGCTCCATCTGTAAGTGAAAGACGAGATGGAACTGGACCTGCCAAAACTGCTCCTCTTGGACTGGGTATGAGTGGTTTAGAGCGTAAGAGACGAACCAGACTTCAACCTCCTGTTGGTAAAGGTGCTGATGCCGGATCTTCCAGTTCTTTCATCAATCAAAGTCAGGAAACCAGGACAGATAGTCAAAATATATTGCAAACACTCGGGGGTCAAGGATCTGCTGTTAATTTGATAAATGCTGATAAGCCTCAAAGGCCCTTGCCCTCCAGCGGTAGTCAGATTGATGTGGCGGGTTTAATGTCTCAGGCTCTACATAGTCCTGCTTTGAATGGTTTGTTGGAAGGGTTTTCACAGCAAACGGGAGTTGACTCACCTGATGGCTTAAGGAACATGTTGCAACAGTTCACACAAAGCCCACAGATGATGAACACGGTCAGTCAGATTGCCCAGCAGGTTGGCAGTCAGGATATGGGGAATATGTTAACCGGAACAGAAAGAGGGCAGGGTGGTGGTGTTGACCTCTCAAGGATGCTTCAACAGATGATGCCCATTGTATCACAAGCCCTTGGAGGGGGAAATCCTCCATCACTGTTCTCTGCTGCAGAACCAGAAAGCCAACAGATGAACACAGTCAGCCAGATTGGCCAGCAGGTTGGCAGTCAGGATATGGGGAGTATGTTAACCGGAACGGAAAGAGGGCAGGGTGGTGGTCTCGACTTCTCAAGGATGTTTCAACAGATGATGCCCATGATACAAGCCCTTGGAGGGGGAAATCCTCCATCACTATTCTCTGCTGCAGAACCAGAAACCCGTGCATCCTACAGGAATGAAAATTCTGAAAATCGAAGTTTGCAGCTTGACCTTCAACCAGTGGCTGATAGGATTGATCGCCTGAGTCCATCTACAGATATCTTCCGTGCTGTAGCTGAAAATGCTGCCCAGCTGTCTAGCAGTGAAAGTGCTTCTGATGATCTTTTGGATGAGTTATGTGGCAATGAGAGTCTTGCTGGTGAATATGTGGAGATGTTGAGATCTGATGTAAGTAAGCTGCTTGAAGGACGTTCTGAGAAGGACAAGTCTTAA 2970 0.4576 MASESSSNEAGSSNVSEDSTVHLNIKTLDSRIYTFQVDKNMPVSLFKEKIANEVGLPVNQQRLIFRGKVLKDEHVLSEYHVENGHTLHLVERQPNQTQTSSATASAETTATNNNRGNNVGPGAPRSRVGQISHSLVLGTINVGDQGEGISQDITRVIGAVLNSFANGGQGTMNAPTSAQTSSAPPGNETVGNQAGNQAPSGQAFQPMPHVVQIPMAAGAIPVPSFNAPIPHSLNTLSVFINRMEQALSQNGYGPNISSTNPGDQRVELPSNTQGLPTLEALTTVLHRAEQLLSGQAVSALSHIAGRMEREGTSADLGIRGQIQSESVQIGIAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGPLSSSTPATLGTVGVGSAPRNVNIHIHAGASLAPIVSAIGSRPNNGEGTRTEQRSEPGSGDSGSTRVLPVRNVISATLPSNPSGIGAAGSTPTGFSISTSQLPPDSAPLSSVLAEIQSRLSNSVGNMQGDNTSLSGQMQSTSRDFSSGSEPRPAQVNEQRDTVEVNGCGASGVSSVGCTSESGVEKTQTEAIKTCSNDERDVLVDKFVSNSSNQDIQSCCSGEATVKSEEVQDEVQDAPSVSERRDGTGPAKTAPLGLGMSGLERKRRTRLQPPVGKGADAGSSSSFINQSQETRTDSQNILQTLGGQGSAVNLINADKPQRPLPSSGSQIDVAGLMSQALHSPALNGLLEGFSQQTGVDSPDGLRNMLQQFTQSPQMMNTVSQIAQQVGSQDMGNMLTGTERGQGGGVDLSRMLQQMMPIVSQALGGGNPPSLFSAAEPESQQMNTVSQIGQQVGSQDMGSMLTGTERGQGGGLDFSRMFQQMMPMIQALGGGNPPSLFSAAEPETRASYRNENSENRSLQLDLQPVADRIDRLSPSTDIFRAVAENAAQLSSSESASDDLLDELCGNESLAGEYVEMLRSDVSKLLEGRSEKDKS* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6155 989 MobiDBLite consensus disorder prediction 434 499 - -
Mal1g6155 989 Gene3D - 8 106 - -
Mal1g6155 989 PANTHER OS07G0498800 PROTEIN 6 834 - -
Mal1g6155 989 PANTHER OS07G0498800 PROTEIN 835 987 - -
Mal1g6155 989 SMART ubq_7 21 92 IPR000626 GO:0005515
Mal1g6155 989 PRINTS Ubiquitin signature 73 94 IPR019956 -
Mal1g6155 989 PRINTS Ubiquitin signature 31 51 IPR019956 -
Mal1g6155 989 PRINTS Ubiquitin signature 52 72 IPR019956 -
Mal1g6155 989 MobiDBLite consensus disorder prediction 515 552 - -
Mal1g6155 989 Pfam Ubiquitin family 23 93 IPR000626 GO:0005515
Mal1g6155 989 MobiDBLite consensus disorder prediction 430 499 - -
Mal1g6155 989 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 834 - -
Mal1g6155 989 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 835 987 - -
Mal1g6155 989 MobiDBLite consensus disorder prediction 170 203 - -
Mal1g6155 989 MobiDBLite consensus disorder prediction 94 127 - -
Mal1g6155 989 MobiDBLite consensus disorder prediction 94 120 - -
Mal1g6155 989 MobiDBLite consensus disorder prediction 617 687 - -
Mal1g6155 989 SUPERFAMILY Ubiquitin-like 7 95 IPR029071 -
Mal1g6155 989 ProSiteProfiles Ubiquitin domain profile. 21 96 IPR000626 GO:0005515
Mal1g6155 989 MobiDBLite consensus disorder prediction 170 204 - -
Mal1g6155 989 MobiDBLite consensus disorder prediction 619 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6155 Mal-Chr1 140515330 140524811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6155 25 92 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 41.176 1.20e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6155 - - mtr:MTR_1g026290 1661.74