Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6140 ATGTTGAGGTGCAAACCGTGTCAGCCCACTCTGCCAACAAGGGTCCATTTCCATCTTGGGTTAACCCCAAGTGTCCAAAAGTTGGTGCGATTTGATGTTGTTGTTACAGCTGATGGTACTGGGAATTTCACCAAGGTTATGGATGTTGTGACTGTTGCTCCTAACTCTAGTGTGAAGCACTATGTGATACTCATCAAAAAGGGTGTTTACAAGGAATATGTTGAAGTCAATAAGAGGAATATCATGATGATCGGGGAGGGCATGGATGCCACATTTATCTCTGGCAATTTTAGCAATGCAACTAATCACTTGGCCACATACAAAACAACAACTTTTTCTCTCTACACTTGCACAAAACGTATATTCAATTACACTCACAACCAACAAAAACAAGCAATACAAAAGCCAGCACAACAGACCACATATGCGTAA 432 0.412 MLRCKPCQPTLPTRVHFHLGLTPSVQKLVRFDVVVTADGTGNFTKVMDVVTVAPNSSVKHYVILIKKGVYKEYVEVNKRNIMMIGEGMDATFISGNFSNATNHLATYKTTTFSLYTCTKRIFNYTHNQQKQAIQKPAQQTTYA* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6140 143 PANTHER PECTINESTERASE 28 115 - -
Mal1g6140 143 Gene3D - 27 141 IPR012334 -
Mal1g6140 143 PANTHER PECTINESTERASE 28 115 - -
Mal1g6140 143 Pfam Pectinesterase 32 114 IPR000070 GO:0030599|GO:0042545
Mal1g6140 143 SUPERFAMILY Pectin lyase-like 30 115 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6140 Mal-Chr1 140375528 140376423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6140 32 114 Carbohydrate Esterase AT3G43270 51.765 3.64e-21 86.7