Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6133 ATGACTCAAGACGAAGAGATGAAAGATCATCCAACACCTACTCCCTCAATTTCTTCACCTATTCCTTCTACATTGCAACATTTGAAGGAAATAGCATCGATCATTGAAACCGGTTCAAACTTGAAGGAAGTTCGCAGAATTTCTCGTGCACTGCGCCTTACTATGGCGTTAAGGCCCAAACTTACTGCTCCTCTTCTCTCATCTTTCGTTGATCATGTTCTTCCTGCTTCTTCCGACCCTCATTCTAGGTTATCTTCCTATCTTCCCAATCCCAAGGATGGTGATCATGAGATGGAAGTGGACACTGCAACATCTGTAGCTATTCAAACTCCAGCCAAGCACTTGTTGCCTGAGCTAGAAATCTACTGTTACTTCCTTGTGCTTCTTTTTCTGATTGATCAAAAACGATACAATGAGGCCAAAGCTTGTTCCTCAGCTAGCATTGATCGGCTCAAGAACTTGAATAGAAGAACTATTGATGTTATTGCTTCGAGACTGTACTTTTATTACTCATATAGCTATGAGCTTACTGGAGATCTTGCTGAAATTCGAGGCAACCTCTTTCAGTTGCACCGGATTGCTACTTTGCGTCATGATGAGCTTGGTCAGGAAACACTTCTTAATTTGTTACTTCGTAACTACCTCCACTACAACCTATATGATCAGGCAGAGAAGTTGAGGTCTAAGGCTCCGCGATTTGAAGCACATTCAAACCAGCAGTTCTGTCGCTATCTATTCTACCTTGGAAAAATTCGGACCATTCAGTTGGAGTATACCGATGCAAAAGAGTCTCTGCTGCAGGCTGCTCGTAAAGCACCGGTTGCAGCACAGGGTTTCAGGATTCAGTGTAACAAGTGGGCCATTATTGTGCGTTTACTGTTAGGAGAAATTCCTGAGAGGACTATCTTCGTGCAGAAAGGAATGGAGAAAGCTTTGAGGCCTTACTTTGAACTTACTAATGCTGTTAGGATTGGTGATTTAGAGCTGTTTAGGAATGTAGCAGAGAAGTATGCTACCACTTTCAAGACAGACGGAACCAATAATTTGATTGTTCGGTTGCGTCATAATGTCATCAGGACTGGGTTGCGCAATATCAGTATATCATATTCTCGCATCTCACTGGCCGATGTAGCTCAGAAGTTGAGGTTGAGCTCTGCAGATCCCATTGCCGATGCTGAAAGCATTATATCAAAGGCTATCCGTGATGGGGCAATAGATGCGACATTGGATCATGCTAATGGATGGATGGTGTCCAAGGAAATTGGAGATATTTACTCTACAAATGAGCCTCAGTTGGCCTTTAATTCTCGGATTGCCTTTTGTCTTAACATGCACAATGAGGCTGTTCAAGCACTGCGTTTTCCGAAAAACACACACAAGGAGAAAGAAATTGCCGAGAAGCGGAGAGAGAGGCAACAACAAGAGCAAGAACTGGCGAAGCATATTGAGGAGGAAGATGATGATGATGACTTCTGA 1476 0.4316 MTQDEEMKDHPTPTPSISSPIPSTLQHLKEIASIIETGSNLKEVRRISRALRLTMALRPKLTAPLLSSFVDHVLPASSDPHSRLSSYLPNPKDGDHEMEVDTATSVAIQTPAKHLLPELEIYCYFLVLLFLIDQKRYNEAKACSSASIDRLKNLNRRTIDVIASRLYFYYSYSYELTGDLAEIRGNLFQLHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAAQGFRIQCNKWAIIVRLLLGEIPERTIFVQKGMEKALRPYFELTNAVRIGDLELFRNVAEKYATTFKTDGTNNLIVRLRHNVIRTGLRNISISYSRISLADVAQKLRLSSADPIADAESIISKAIRDGAIDATLDHANGWMVSKEIGDIYSTNEPQLAFNSRIAFCLNMHNEAVQALRFPKNTHKEKEIAEKRRERQQQEQELAKHIEEEDDDDDF* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6133 491 SUPERFAMILY "Winged helix" DNA-binding domain 351 421 IPR036390 -
Mal1g6133 491 MobiDBLite consensus disorder prediction 457 480 - -
Mal1g6133 491 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3 1 489 - -
Mal1g6133 491 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 1 489 - -
Mal1g6133 491 Pfam Proteasome regulatory subunit C-terminal 423 489 IPR013586 GO:0000502|GO:0030234|GO:0042176
Mal1g6133 491 Gene3D - 245 452 - -
Mal1g6133 491 SMART PINT_4 348 441 IPR000717 -
Mal1g6133 491 MobiDBLite consensus disorder prediction 457 491 - -
Mal1g6133 491 Coils Coil 457 485 - -
Mal1g6133 491 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 348 441 - -
Mal1g6133 491 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g6133 491 Pfam PCI domain 314 419 IPR000717 -
Mal1g6133 491 ProSiteProfiles PCI domain profile. 242 423 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6133 Mal-Chr1 140306290 140312060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6133 K03033 - gmx:100814379 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6133 1 140306290 140312060 Mal1g6133 1 140306290 140312060 ECH
Mal1g6133 1 140306290 140312060 Mal2g0455 2 5173499 5179245 PCT