Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6119 ATGAAAAAAGTGGATGAGTTATCTATTCTTTGTGATATTGATGTTTGTGTGATTCTCTATGCTCCCAACTTTGAAGGAGAAGGGTTTGTTGAACCTGAAACATGGCCTAAAGACACAGAAAAGGTGGCACGAATCCTCCAAAAGTACTATAACACATCAATTGACAAACGTCCTAAGATCTATGATGTTCAAGAATATTTCAAAGGAAAGAAGAAAAATGTCGAAATTGAGATTTCCAAAGTGCGCAGAGAGAAGCAAAAGATATTTTATCAAACTTGGAATGAAGATTTCAATTCTTTTGGAGTGGAACAATTGAGGTTATTTGCTAGGGTATTAGATTCTAAGCTTCATGCTTGCAATCAAAAGATGAATATGCTAAAAGGAGATCTTAAGGGAAAAGCAATACCTGAATCCCACAAGGTTGATGAACCCAATACTCCTTATTTTACCTCAAATCCAAGTAGCTACTTCAATCTCGTGCAAAACAACATGTCTCAGGCACAAATTTACCCTCAATTTGATAATTTTAGTGACCAAAACCCGTTAGGGTTTTGGCCACTTCAATTGGGGCAGACTTCCCAACCTTCTCCGATGCTTTCTGATGCGCAGACTCCCTATAGGGTGGAGTCCGTGGAGTTTAATGGGTCTGATCAGGTTGATGCTAATGTTACCTATGATCCCAAAATTGGTATGATGAGGAACAATGAAGCAGAAAATGATGAAAACCTGTTGGCATACTATTGCAATGGAACTGCACCAACAATTCAATCATATGAATATCCTATTTCTATGCAAAGTCTTCCTTTTCAGAATCTTCCAAACCTACCTCATGGGTTTCAACTTGAAGAACTCCATGATATGAATAATCTTCAAGCTCATATGTTCAACTACATGGATGGAAGGAAGGAGCCAATATAA 918 0.3769 MKKVDELSILCDIDVCVILYAPNFEGEGFVEPETWPKDTEKVARILQKYYNTSIDKRPKIYDVQEYFKGKKKNVEIEISKVRREKQKIFYQTWNEDFNSFGVEQLRLFARVLDSKLHACNQKMNMLKGDLKGKAIPESHKVDEPNTPYFTSNPSSYFNLVQNNMSQAQIYPQFDNFSDQNPLGFWPLQLGQTSQPSPMLSDAQTPYRVESVEFNGSDQVDANVTYDPKIGMMRNNEAENDENLLAYYCNGTAPTIQSYEYPISMQSLPFQNLPNLPHGFQLEELHDMNNLQAHMFNYMDGRKEPI* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6119 305 PANTHER MADS BOX PROTEIN 1 203 - -
Mal1g6119 305 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 1 23 IPR002100 GO:0003677|GO:0046983
Mal1g6119 305 ProSiteProfiles MADS-box domain profile. 1 33 IPR002100 GO:0003677|GO:0046983
Mal1g6119 305 Gene3D - 1 74 IPR036879 GO:0003677|GO:0046983
Mal1g6119 305 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL82 1 203 - -
Mal1g6119 305 SUPERFAMILY SRF-like 1 60 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6119 Mal-Chr1 140153238 140154155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6119 2 117 Type I MADS-box Gene Family AT5G55690 35.043 2.31e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal1g6119 SRF-TF 4.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6119 - - mtr:MTR_1g114730 357.836