Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6095 ATGGTGCATTCAACCAAAGAATCATCTTCATTTTTCTTCTACAATATCATGTTCTTATTAGTTATTTGGTCCACTTTTCTTATAGATATCACAAATGGAGTGGTTATTGCTAATGCCACAGTTGCTGCTGACGGGAGTGGGAATTACACTACGGTGATGGATGCCGTACTTGCAGCACCTGAATTCAGCATGCAGCGCTATGCAATATTCATAAAGAAGGGTGTTTACATAGAGAAGAGAGTTGTGATTGGTGACAAAAAGTGGAATCTAACGATGATTGGAGAGGGCATGGACGCCACTATTATCTCCGGTAACTTGACTGTCAGTGGTGCAGGGTTCATAGCACAGGATATTTCTTTCAAGAATACTGCTGGGCCGGAAAATGGCCAAGCAGTGGCACTATATTCAGATTCTGACTTCTCTGCATTTTATAAAGTTGGAATTTATGGTTATCAAGATACTTTGTGTGCCGATACCAATCGCCAATTTTATAAAGACTGCAAAATTAGTGGCACAGTAGATTTCATATTTGGATATGCAACTGTCAAGCTGCCAAATATTGGTCAAAAAAGGGATGCCAAAACAAAGGGGAATTAG 597 0.3987 MVHSTKESSSFFFYNIMFLLVIWSTFLIDITNGVVIANATVAADGSGNYTTVMDAVLAAPEFSMQRYAIFIKKGVYIEKRVVIGDKKWNLTMIGEGMDATIISGNLTVSGAGFIAQDISFKNTAGPENGQAVALYSDSDFSAFYKVGIYGYQDTLCADTNRQFYKDCKISGTVDFIFGYATVKLPNIGQKRDAKTKGN* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6095 198 SUPERFAMILY Pectin lyase-like 37 186 IPR011050 -
Mal1g6095 198 Gene3D - 34 187 IPR012334 -
Mal1g6095 198 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 35 184 - -
Mal1g6095 198 PANTHER PECTINESTERASE 35 184 - -
Mal1g6095 198 Pfam Pectinesterase 38 184 IPR000070 GO:0030599|GO:0042545
Mal1g6095 198 ProSitePatterns Pectinesterase signature 2. 169 178 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6095 Mal-Chr1 139826057 139828023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6095 31 181 Carbohydrate Esterase AT3G43270 54.545 3.52e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6095 K01051 - gmx:100777500 198.364