Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6089 ATGGGGAAGACTGATTTGGATATGACCTCCGATGAAATTGAAAACTATCAATGGTATCTCGCAAAGATATTCGAGATGGGGAAGACTGATTTGGATATGACCTCCGATGAAATTGAAAACTATCTACGGTTTCTCGCAAAGATACTTGAGATGGGGAAGACTGATTTGGATATGACCTCCGATGAAATTGAAAACTATCTATGGTTTCTCGCAAAGATATTCGAGATGGGGAAGACTGATTTGGATATGACCTCCGATGAAATTGAAAACTATCTACGGTTTCTCGCAAAGACACTCGAGATGGGGAAGACTGATTTGGATATGAACTCCGATGAAATTGAAAACTATCTACGGTTTCTCGCAAAGATACCTTATGGTGTGGATAAGGATGGAGGTTTGTCAAAGCACATAGTCGACACTGGGAAGGAGGGTATGCTCTTTGAGAATCTCTCTCTCTCGTCGTTGCCGAAGACTGATTTGGATAGGCCCTTCGATGTAAACTATATACGGTCTCACATCCCTAATATACTCGAGACGGGGAAGACTGATTTGGATATGACCTACGATGAAATTGAAAACTATCTACGGTTTCTCGCAAAGATACCTTATGGTGTGAAAGCGAATGATATATGTAAGGATGGAGGTTTGTTAATGTACATACTCGAGAAGGGGAAGAAGGGGGGTCCAGATTGTCAAAACCCTCATGATCTTGATCATGTTTTAGTTAAGTACGAAGTACGTCTTTTTGACGATGGAACACTTGTATCAAAATCTCATGATTATGGAGTCAAGTTCAAACTAAAGGATGGCCATTTTTGTCCTGCATTCTCAAAGGTTGTTAAGACCCTGGGAAAGAGAGATAAAGCCATTGTGATCGTCAAGCCCAAATATGGATTTGGTGAAAAGGGCAGGCCAGCTGATGATGATCAAGCTTCAGTTCCGCCTAATGCAACATTGGAAATTACTCTCAGGTTACTTAATTGGAAGAAAGTACCTTTTTATAAGAATGTCCTCAAGGAAGGAGAAGGGTATGAGTGTCCAAATAAGGGAGCTGTTGTCAAATTGAGACTAATTGGTAAGCTGCAAGATAGCACTGTATTTTTTACCAAGGGCCATGGTGATGATGATGATGATCAAGCACAGCTGTTTGAATTTAAAACAAATGAGAAGCAAGTGATTAAGGGGCTTGATAGAGCTGTAATGACCATGAAGAAGGGTGAGGTAGCTTTCTTGACTATTGGGCCTAAATATGCGTTTGGTTCTCAGCCTAAGTTGGACTTTGCTCCTCCTAATTCAACCGTGTATTACGAGGTTGAGCTAGTATCATTCGTAAAGGGTAAGGAGATCTCGGACATGAACACTAAAGAGAAGATGGAAGTTGCTCGTAAGAAGATAGAAAAAGGGAAAGCATTGTACCGAGCTGATGAAGATGAAAGAGCTTCTAAAAGATTTGAGAAGGCTCTAAAGTTCATAAAGAATGATATTTCCTTCCGTGGTAAGCAGAAGAAATATAAGAAATATGCCATGGACTTGATGGATTATTGTACCGAGAAAATTGCTGAATGCAGAGAGGATTATAAAGAGGCTCAGATTGCCTTTTTTGATAGGATGGTTCAGGGGAGGGCGCAGCAGAATTATGCCGTTTCTTGTGAGATCTGGGAAAATTATTTGAGGCGCAATAAGGATTCCGATAAAGACAGGAAATTTAGACTGTGCATATAA 1722 0.4042 MGKTDLDMTSDEIENYQWYLAKIFEMGKTDLDMTSDEIENYLRFLAKILEMGKTDLDMTSDEIENYLWFLAKIFEMGKTDLDMTSDEIENYLRFLAKTLEMGKTDLDMNSDEIENYLRFLAKIPYGVDKDGGLSKHIVDTGKEGMLFENLSLSSLPKTDLDRPFDVNYIRSHIPNILETGKTDLDMTYDEIENYLRFLAKIPYGVKANDICKDGGLLMYILEKGKKGGPDCQNPHDLDHVLVKYEVRLFDDGTLVSKSHDYGVKFKLKDGHFCPAFSKVVKTLGKRDKAIVIVKPKYGFGEKGRPADDDQASVPPNATLEITLRLLNWKKVPFYKNVLKEGEGYECPNKGAVVKLRLIGKLQDSTVFFTKGHGDDDDDQAQLFEFKTNEKQVIKGLDRAVMTMKKGEVAFLTIGPKYAFGSQPKLDFAPPNSTVYYEVELVSFVKGKEISDMNTKEKMEVARKKIEKGKALYRADEDERASKRFEKALKFIKNDISFRGKQKKYKKYAMDLMDYCTEKIAECREDYKEAQIAFFDRMVQGRAQQNYAVSCEIWENYLRRNKDSDKDRKFRLCI* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6089 573 PANTHER PEPTIDYLPROLYL ISOMERASE 444 529 - -
Mal1g6089 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 350 444 IPR001179 GO:0003755
Mal1g6089 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 237 329 IPR001179 GO:0003755
Mal1g6089 573 Gene3D - 206 329 IPR046357 GO:0003755
Mal1g6089 573 SUPERFAMILY FKBP-like 334 461 - -
Mal1g6089 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 444 529 - -
Mal1g6089 573 Gene3D - 330 447 IPR046357 GO:0003755
Mal1g6089 573 PANTHER PEPTIDYLPROLYL ISOMERASE 207 333 - -
Mal1g6089 573 PANTHER PEPTIDYLPROLYL ISOMERASE 335 449 - -
Mal1g6089 573 Gene3D Tetratricopeptide repeat domain 448 534 IPR011990 GO:0005515
Mal1g6089 573 SUPERFAMILY FKBP-like 203 332 - -
Mal1g6089 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 345 441 IPR001179 GO:0003755
Mal1g6089 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 234 325 IPR001179 GO:0003755
Mal1g6089 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 335 449 - -
Mal1g6089 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 207 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6089 Mal-Chr1 139660490 139667495 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6089 209 530 Calmodulin-binding Proteins AT3G25230 54.328 7.72e-106 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6089 K09571 - egt:105955963 353.599