Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6080 ATGAAATTGAAAACTATCTACGGTATCTCCGCACAAGTGAATATACCTTATGGTGTGGAAGGGAATGATATATGTAAGGATGGAGGTTTATTAAAGTACATACTCGAGGAGCGGAATGGGAAGGGGAAGGTGGAGAAGTGGGGTATAGATTGTCGAAACCCTCATGATCTTGATCATGTTTTAGTTAAGTATGAAGCACGTCTTCTTGACGATGAAACACTTGTATCAAAATCTCATGATTATGGAGTCAAGTTCAAACTAAAGGATGGCCATTTTTGTCCTGCAATCTCAAAGGTTGTTAAGACCATGATAAAGGGAGAGAAAGCCATTTTGATCGGCAAGCCAGCTCACGGTGATGATGATCAAGCTTCAGTTCCGCCTAATGCAACATTGAAAATTACTCTCAAGTTACTTAATTGGAAGAAAGTACCTTTTTTTAAGATGGTCCTCAAGGAAGGAGAAGGATATGAGTGTCCAAATAAGGGAGCTGTTGTCAAATTGAAACTAATTGGCAAGCTGCAAGATAGCACTGTATTTTTTACCAAGGGCCATGGTGATGATGATCAAGCGCAGCTGTTTGAATTTAAAACAAATGAGAAGCAAGTGATTAAGGGGCTTGATAGAGCTGTAATGACCATGAAGAAGGGTGAGGTAGCTTTCTTGACTATTGGGCCTAAATATGCGTTTGGTTCTCAGCCTAAATCGGACTTGGTTCCTCCTAATTCAATCGTGTATTACGAGGTTGAGCTAGTATCATTCGTAAAGGGTAAGGAGATCTCGTACATGAACAATAAAGAGAAGATAGGAGCTGCTCGTAAGAAGAAAGAAAAAGGGGAAGCATTGTTCAAAGCTGGTGAAGAGGAAAGAGCTTCTAAAAGATTTGAGAAGGCTCTAAAGTTCATAAAGAATGATACTTCCTTCCGTGGTAAGGAGAAGAAATATGCCAAGGAATTGAAGGATTATTGTAATATGAAAATTGATGAATGCAGAGAGGATTATAAAGAGAAACAGATTGCCTTTTATAATGAAAAAGAGTACAATATCCAATATATTTGTCTCATTAAAAACCTTACCAGGAAAACCCAGTGGGACAAAACCATGGTGAAAGGAAAAAGAATGCAGAATATATTTTATATCAGTTGCTCAAACATTTTACTTGGGATTTACTTTGTAAAAGATATTCAAGATTATCACATGAACATCACCACTTTTCTGAAGGTCATATGTGAAAAAGAACTTTGA 1242 0.3752 MKLKTIYGISAQVNIPYGVEGNDICKDGGLLKYILEERNGKGKVEKWGIDCRNPHDLDHVLVKYEARLLDDETLVSKSHDYGVKFKLKDGHFCPAISKVVKTMIKGEKAILIGKPAHGDDDQASVPPNATLKITLKLLNWKKVPFFKMVLKEGEGYECPNKGAVVKLKLIGKLQDSTVFFTKGHGDDDQAQLFEFKTNEKQVIKGLDRAVMTMKKGEVAFLTIGPKYAFGSQPKSDLVPPNSIVYYEVELVSFVKGKEISYMNNKEKIGAARKKKEKGEALFKAGEEERASKRFEKALKFIKNDTSFRGKEKKYAKELKDYCNMKIDECREDYKEKQIAFYNEKEYNIQYICLIKNLTRKTQWDKTMVKGKRMQNIFYISCSNILLGIYFVKDIQDYHMNITTFLKVICEKEL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6080 413 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 162 254 IPR001179 GO:0003755
Mal1g6080 413 Gene3D - 144 258 IPR046357 GO:0003755
Mal1g6080 413 SUPERFAMILY FKBP-like 147 271 - -
Mal1g6080 413 Gene3D - 21 141 IPR046357 GO:0003755
Mal1g6080 413 PANTHER PEPTIDYLPROLYL ISOMERASE 22 146 - -
Mal1g6080 413 PANTHER PEPTIDYLPROLYL ISOMERASE 262 336 - -
Mal1g6080 413 PANTHER PEPTIDYLPROLYL ISOMERASE 147 260 - -
Mal1g6080 413 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 147 260 - -
Mal1g6080 413 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 22 146 - -
Mal1g6080 413 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 262 336 - -
Mal1g6080 413 Gene3D Tetratricopeptide repeat domain 259 346 IPR011990 GO:0005515
Mal1g6080 413 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 57 141 IPR001179 GO:0003755
Mal1g6080 413 SUPERFAMILY FKBP-like 43 144 - -
Mal1g6080 413 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 157 251 IPR001179 GO:0003755
Mal1g6080 413 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 138 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6080 Mal-Chr1 139331740 139336036 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6080 23 337 Calmodulin-binding Proteins AT3G25230 54.762 4.00e-103 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6080 K09571 - gmx:100803189 333.954