Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6058 ATGGCTCTCCTTAATTCCTTGCCTGAACAATCTCACCCCAAAAAACAACTCCCAACAAAACACAAACAAAAGAACCAACAACAACAGAATCAAAAACAGAAACCAAAACCAAAACAAAAACCACCTTCTTCATGGGATCAAATCAAAAACATCCTAACATGCAAACAGATCGAAGGTTCAAGAGTTCATGATCCTTCAAAACCAAACAATAATAGTTACTCAAAATTGGGTTCTTCTTGCAGCTCCATTTGTAGCTTCAGAGATGTTGTTCATGGAAACACTAGAGTTGTTCATAGGTCTGATAATTCATCACCAGAGAGTAGCATTTTGGGTCAAGAAACAAGTTTACTCAAAAGAAAACCTGTCACTACTTCATCAACTCGCTCTGCATCATGTTCTGGGAAATCATCCAACGGTGGAGGAAACTACACATCATCATCTTCCAGAGGAATGCAGTTTAGGAAGCTCTCTGGATGTTATGAATGTCACATGATCGTTGACCCTAGCAGGCTACCAATTCCTAGGAGCACTTTGTGTCGTTGTGATCAGTGTGGAGAGGTTTTCCCTAAGATTGAAAGCTTGGAGCTTCATCAAGCTGTTCGACATGCAGTTTCGGAGCTGGGTCCAGAGGATTCAGGTCGTAACATCGTGGAGATAATCTTCAAATCAAGCTGGTTGAAGCGTGAGAGTCCAATGTGCAAGATCGAACGGATACTAAAAGTCCACAACACACAACGAACAATCCAACGGTTTGAGGAATGCAGAGATGCAGTAAAATCCCGTGCATCCAACACCACCAAGAAAAATCCCCGGTGTGCTGCGGACGGCAACGAACTCCTCCGTTTCCACAGCACATCCTTATTGTGCGCACTGGGCGCACATGGTTCCTCTGCCTTGTGCGGCGCTGTGCCAGGATGCGGAGTGTGCAACATCATTCGACATGGTTTTCAAAAGAAAGGTGGAGTGAAGACCAATGCTAGTAGTGGTAGAGCCCACGATAATTCGGTTGGAGAAGATTCTAGAAGGGCAATGCTGGTATGCCGTGTGATTGCCGGGAAAGTGAAGCGTGTGGCGGAGGAAGGTGCACCGGTGGTGTCGGAGGAGGAAATGGTGTGTTTTGATTCTATTGCGGGGAATGCAGGGACTTACTCGAATCTCGAAGATTTAACTGTTTTCAATCCAAGAGCTATTCTTCCTTGTTTCGTAGTCATTTACAAGGTGCTTCCATGCTAA 1233 0.4477 MALLNSLPEQSHPKKQLPTKHKQKNQQQQNQKQKPKPKQKPPSSWDQIKNILTCKQIEGSRVHDPSKPNNNSYSKLGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSILGQETSLLKRKPVTTSSTRSASCSGKSSNGGGNYTSSSSRGMQFRKLSGCYECHMIVDPSRLPIPRSTLCRCDQCGEVFPKIESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKRESPMCKIERILKVHNTQRTIQRFEECRDAVKSRASNTTKKNPRCAADGNELLRFHSTSLLCALGAHGSSALCGAVPGCGVCNIIRHGFQKKGGVKTNASSGRAHDNSVGEDSRRAMLVCRVIAGKVKRVAEEGAPVVSEEEMVCFDSIAGNAGTYSNLEDLTVFNPRAILPCFVVIYKVLPC* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6058 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 179 207 IPR013087 -
Mal1g6058 410 SUPERFAMILY ADP-ribosylation 204 406 - -
Mal1g6058 410 MobiDBLite consensus disorder prediction 1 46 - -
Mal1g6058 410 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 408 - -
Mal1g6058 410 MobiDBLite consensus disorder prediction 96 149 - -
Mal1g6058 410 ProSitePatterns Zinc finger C2H2 type domain signature. 179 202 IPR013087 -
Mal1g6058 410 MobiDBLite consensus disorder prediction 22 46 - -
Mal1g6058 410 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 28 408 - -
Mal1g6058 410 Gene3D - 203 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6058 Mal-Chr1 138862464 138866386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6058 1 408 C2H2 Transcription Factor Family AT1G75710 61.207 3.89e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g6058 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6058 - - aprc:113874200 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6058 1 138862464 138866386 Mal1g6058 1 138862464 138866386 ECH