Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6052 ATGGACATGGACCTCGACCAAACTTCCCACAACAACAAAGATGCAAAACCCATTTTGGTAATCTTAGTTGGTGCACCTGGAAGCGGGAAATCAACCTTTTGTGAAGAGGTTATGCGTTCCTCTTCTCGCGCTTGGGTTCGCGTTTGTCAGGACACTATTGGAAATGGTAAAGCAGGAAGTAAAGCCCAATGCCTAAGTAGTGCAGCTAGATCATTGAAGGACGGGAAAAGTGTATTCATTGACAGGTGCAATCTCAACAGAGAACAGCGCTCAGATTTTATAAAGCTTCGGGGTGAAACCCAAATAGATATGCATGCAGTTGTACTTGATCTTCCTGCTAAGCTTTGTATCTCTCGATCTGTTAAACGGTCTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAAAATAAAGAGCTGCCCAAATTAAGTGAAGGCTTTAACCGAATAACATTTTGTCAGAGTGAGAGTAATGTCAAAGATGCTATTGATACATATCAGAAACTTGGGCCACTGGAGAACCTTTCACATGGCTGCTTTGGTCAGAAAAATCCAGATTCCAAAATCCAATCTAGTATAATGAAATTCCTGAAAAAGGCAGAGGTCCCAGTTAATACTGCATCTAATGAAAATGCCGTTGGAGACTCTACTTCCCAGACTCCTGGAAATAATGATTCCCTCTGTAAAGATATGGAAAAAATTCCATTAACACATGATAATTCCAAGTTAGGGTCAAAGGAAATAGAAGGCCAGGCTGATAAATCTGCTGGTTCCCGTCACAATCAAGTGTCTCTTGATGGTACTCCGACTCTGGCATTTCCATCTATTTCAACAGCTGATTTCCAATTCAACCATGACAAGGCAGCTGATATTATTGTTGAGAAGGTAGCAGAGTATTCAAATAAGATGGAGAATGGCAGATTTGTTCTAGTTGACTTGACTCATAAGTCAAAGATTTTGTCCTTAGTTAAATCCAAAGCGGCAGAAAAGAACATTGACAGCCGAAAGTTCTTAACCCATGTTGGAGATATCACTCGCCTTTATTCAACAGGAGGTTTGCGCTGTAATGTCATAGCAAATGCTGCCAACTGGCGGCTAAAACCTGGTGGTGGAGGTGTTAATGCATCAATTTTTGATGCCGCAGGTCCTGAACTGGAGTCTGCAACGAAAGAAAAAGCAAAGACTCTTTCACCTGGGAATGCTGTTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAAGGTGTGACCCATGTAATACATGTCCTTGGACCTAATATGAATCCCCAAAGGCCAAATTGTCTGAACAATGATTATGAAAAAGGCTGCAAAGTTCTCCAAGATGCTTATGCATCACTATTTGAAGGTTTTGCATCAATTGTTAGGAATCACGTACAACAAAATGAAAACCTTGGAAATAAGTCTTTGAAATTGCAGGATCAGTCTGAACAGTGTTCCACAAATCATTCCACTAATACTGATTTAAAGAGTAAGAGATATGCTGATCATGGATTGGAAAAAAGCAAGAAATACAAGGGAACTCAAGATGGTTTTGACATGATGTTTACGGGTTTCAGGGATGAAAAGGGAGATTCAGAGCATAAAAGAATCGATGGGAGCACGAGGAAGGCATGGGGATCATGGGCCCAAGCTTTTCACCTAATAGCTATGCATCCTGAAAAGCATAAGGGTGACTTGCTTGAAATTTCAGAAGACATTGTTGTATTGAATGATATGTATCCTAAGGCACAAAAACATGTTCTGGTGTTGGCACGGAGTGGAGGTCTTGATTGCCTGTCAGATGTTCAAAATGAGCACCTTTCAGTATTGAAAAGGATTCATGCTGTGGGTTTAAAATGGGCTGAGAAATTCTTGAGCGAGAATGCGTCACTGGTATTTCGCCTTGGATATCACTCGGTTCCTTCAATGCGACAACTACACTTACATGTTATTAGCCAGGACTTTGACTCAAAACATTTGAAGAATAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGTGACTCGGTGGATATAATTGATGAGGTATCTAATCATGGAAAAGCAACATTGAAAGATGATGACAAGCTACTGTCTATGGAATTGAGGTGCCACAAATGTAAAAGTGCACATCCAAACATACCCCGGTTAAAGTCACATATTAGTAGCTGTCAAGCACCATTTCCTGCTTACCTACTCGAAAATGGGCGTTTGGTTGGTGCATGCACCAGATAA 2268 0.4109 MDMDLDQTSHNNKDAKPILVILVGAPGSGKSTFCEEVMRSSSRAWVRVCQDTIGNGKAGSKAQCLSSAARSLKDGKSVFIDRCNLNREQRSDFIKLRGETQIDMHAVVLDLPAKLCISRSVKRSGHEGNLQGGKAAAVVNRMLQNKELPKLSEGFNRITFCQSESNVKDAIDTYQKLGPLENLSHGCFGQKNPDSKIQSSIMKFLKKAEVPVNTASNENAVGDSTSQTPGNNDSLCKDMEKIPLTHDNSKLGSKEIEGQADKSAGSRHNQVSLDGTPTLAFPSISTADFQFNHDKAADIIVEKVAEYSNKMENGRFVLVDLTHKSKILSLVKSKAAEKNIDSRKFLTHVGDITRLYSTGGLRCNVIANAANWRLKPGGGGVNASIFDAAGPELESATKEKAKTLSPGNAVVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNCLNNDYEKGCKVLQDAYASLFEGFASIVRNHVQQNENLGNKSLKLQDQSEQCSTNHSTNTDLKSKRYADHGLEKSKKYKGTQDGFDMMFTGFRDEKGDSEHKRIDGSTRKAWGSWAQAFHLIAMHPEKHKGDLLEISEDIVVLNDMYPKAQKHVLVLARSGGLDCLSDVQNEHLSVLKRIHAVGLKWAEKFLSENASLVFRLGYHSVPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTAFFRDSVDIIDEVSNHGKATLKDDDKLLSMELRCHKCKSAHPNIPRLKSHISSCQAPFPAYLLENGRLVGACTR* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6052 755 Gene3D Leucine Aminopeptidase, subunit E, domain 1 267 335 IPR043472 -
Mal1g6052 755 Gene3D - 2 176 IPR027417 -
Mal1g6052 755 SMART YBR022w_8 344 484 IPR002589 -
Mal1g6052 755 ProSiteProfiles Macro domain profile. 332 532 IPR002589 -
Mal1g6052 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 163 IPR027417 -
Mal1g6052 755 Gene3D Leucine Aminopeptidase, subunit E, domain 1 336 479 IPR043472 -
Mal1g6052 755 PANTHER APRATAXIN-RELATED 16 752 - -
Mal1g6052 755 Pfam C2HE / C2H2 / C2HC zinc-binding finger 680 733 IPR032566 -
Mal1g6052 755 PANTHER APRATAXIN 16 752 IPR026963 GO:0003677|GO:0006281|GO:0033699
Mal1g6052 755 Pfam Macro domain 367 446 IPR002589 -
Mal1g6052 755 MobiDBLite consensus disorder prediction 488 511 - -
Mal1g6052 755 Pfam AAA domain 19 147 - -
Mal1g6052 755 Gene3D - 557 738 IPR036265 -
Mal1g6052 755 SUPERFAMILY HIT-like 575 719 IPR036265 -
Mal1g6052 755 MobiDBLite consensus disorder prediction 488 504 - -
Mal1g6052 755 ProSitePatterns HIT domain signature. 644 662 IPR019808 -
Mal1g6052 755 Pfam Scavenger mRNA decapping enzyme C-term binding 568 675 - -
Mal1g6052 755 SUPERFAMILY Macro domain-like 325 465 IPR043472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6052 15 751 C2H2 Transcription Factor Family AT5G01310 57.297 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6052 K10863 - gmx:100786762 1166.37