Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6051 ATGAGTAGGGGAAAGTTTCCTATTAACATTCTCTTTATTGGTCATGTCAACTCCGGGAAGTCAACTACTGCTGGTCATTTGATCTACAAGTTTGGAGGTATTGAAAAGAATGTGATTGACAAATTTGAGAAAGAAGCTGCCGAGATAAACAGGCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCCGAGCGTGAAAGAGGTATCACAATTGACATTTCTCTATGGAAGTTTGAGACAACCAACTTCTCCTGCACTCTCATTGATGCCCCTGGACACAGGGATTTCATTAAGAACATGATAACCGGAGCGTCCCAAGCTGACTGTGCTGTTCTTATCATTGATTCCACAACTGGTGGTTTTGAAGCTGGTTTTTGTAAGGATGGTCAGACCACTGAACATGCTCTTCTTGCCTTCACTCTTGGTGCTTCACAAATGATCTGTTGCTGCAACAAGATGGATGCCACTACACCCAAATACTCCAAGGATATGTATGAAGAAATTGTGAAGCAAATTTCACCCTTTTTGAGCGAGGTTGGCTATAACCTAGATAAAACTCCGTTTATTCCCATCTCTGGTTACGAGGGAGATAACATCATTGAGCGCTCTACTAACCTTGACTGGTACAACGGTCCCACCCATCTTGAAGCTCTTGACCAAATCAGAAGGCCTAAGAGAGACATGCGTCAAACTGTGGCTATTGGAGTCATCAAGGATGTGAAGAAGAAGGATCCTGCACGGTCAAATCAAGGATGGGAAGAAGAAGTAATCCGGATGATGGAGGAGGGGTGA 798 0.4386 MSRGKFPINILFIGHVNSGKSTTAGHLIYKFGGIEKNVIDKFEKEAAEINRRSFKYAWVLDKLKAERERGITIDISLWKFETTNFSCTLIDAPGHRDFIKNMITGASQADCAVLIIDSTTGGFEAGFCKDGQTTEHALLAFTLGASQMICCCNKMDATTPKYSKDMYEEIVKQISPFLSEVGYNLDKTPFIPISGYEGDNIIERSTNLDWYNGPTHLEALDQIRRPKRDMRQTVAIGVIKDVKKKDPARSNQGWEEEVIRMMEEG* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6051 265 Pfam Elongation factor Tu GTP binding domain 8 202 IPR000795 GO:0003924|GO:0005525
Mal1g6051 265 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 229 - -
Mal1g6051 265 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mal1g6051 265 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mal1g6051 265 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Mal1g6051 265 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mal1g6051 265 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mal1g6051 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 225 IPR027417 -
Mal1g6051 265 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mal1g6051 265 CDD EF1_alpha 9 227 - -
Mal1g6051 265 Gene3D - 1 226 IPR027417 -
Mal1g6051 265 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 227 IPR000795 GO:0003924|GO:0005525
Mal1g6051 265 PANTHER TRANSLATION FACTOR 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6051 Mal-Chr1 138797764 138798629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6051 1 228 Eukaryotic Initiation Factors Gene Family AT1G07930 80.263 2.76e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6051 K03231 - cit:102613486 388.267