Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6050 ATGTTTGCTAAGCTTGTTAGTAAGTTTGATAGGAATACTAGGACTAATATGGAAATTGAGAAAGAGCCCAAATTCTTGAAGAATGGTGATGCTGGTATTATTAAGATAATTCCCACCAAGCCTATGGTAGTAGAGACTTTTACTCGTTATCCTCCACTAGGCCGTTTTGCTGTGAGAGACATGCGTCAAAATGTGGCTATTGGAGTCATCAAGGATGTGAAGAAAAAGGATCCTGCATTGTCAAATCAAGGATGGGAAGAAGAAGTAATTCGCATGATGGGGGAGAATTAG 291 0.3952 MFAKLVSKFDRNTRTNMEIEKEPKFLKNGDAGIIKIIPTKPMVVETFTRYPPLGRFAVRDMRQNVAIGVIKDVKKKDPALSNQGWEEEVIRMMGEN* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6050 96 Pfam Elongation factor Tu C-terminal domain 3 73 IPR004160 -
Mal1g6050 96 Gene3D Translation factors 1 74 - -
Mal1g6050 96 PANTHER TRANSLATION FACTOR 2 79 - -
Mal1g6050 96 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 2 74 IPR009001 -
Mal1g6050 96 PANTHER BNAC08G43440D PROTEIN 2 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6050 Mal-Chr1 138789173 138789463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6050 2 79 Eukaryotic Initiation Factors Gene Family AT1G07930 71.795 2.85e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6050 K03231 - psom:113310543 125.176