Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6039 ATGAAGATTTTCGTTGCACAATTGTTTTTTAATAGCTATGTTAATGGTAGCTTTGCTGGTCATTTGATCTACAAGCTTGGAGGTATTGAAAAGGATGTCATTGACAGATTTGAGGAAGAAGCTGCTGAGATAAACAGACGTTCATTCAAATATGCTTGGGTGCTTGACAAGCTCAAGGCCGAGCGTGAAAGAGGTATCACAATTGACATTTCTCTATGGAAGTTTGAGACAACCAACTACTACTGCACTCTCATTGATGCCCCCGGACACAGGGATTTCATTAAAAACATGATAACCGGAGCGTCCGAAGCTGACTGTGCTGTTCTTATCATTGATTCTACAACTGGTGGTTTTGAAGCTGGTTTTTGTAAGGATGGTTAG 381 0.4068 MKIFVAQLFFNSYVNGSFAGHLIYKLGGIEKDVIDRFEEEAAEINRRSFKYAWVLDKLKAERERGITIDISLWKFETTNYYCTLIDAPGHRDFIKNMITGASEADCAVLIIDSTTGGFEAGFCKDG* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6039 126 PANTHER TRANSLATION FACTOR 19 126 - -
Mal1g6039 126 Gene3D - 17 126 IPR027417 -
Mal1g6039 126 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 126 IPR000795 GO:0003924|GO:0005525
Mal1g6039 126 Pfam Elongation factor Tu GTP binding domain 18 116 IPR000795 GO:0003924|GO:0005525
Mal1g6039 126 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 19 126 - -
Mal1g6039 126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 121 IPR027417 -
Mal1g6039 126 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 IPR031157 -
Mal1g6039 126 PRINTS GTP-binding elongation factor signature 99 110 IPR000795 GO:0003924|GO:0005525
Mal1g6039 126 PRINTS GTP-binding elongation factor signature 63 71 IPR000795 GO:0003924|GO:0005525
Mal1g6039 126 PRINTS GTP-binding elongation factor signature 83 93 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6039 Mal-Chr1 138633259 138634332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6039 20 126 Eukaryotic Initiation Factors Gene Family AT5G60390 87.850 6.27e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6039 K03231 - mtr:MTR_1g024165 209.534