Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6037 ATGTCGGATGGAAAGACGCGTATTGCGATCGTTAGCAACGACAGATGCAAACCCAAAAAGTGTCGTCAAGAGTGCAAGAGGAGTTGTCCTGTCGTCGGAACCGTTGAGGTTACTTCTGCGTCCAAGGTTGCTTTCATATCTGAGGATTTGTGCACTGGATGCCGTATTTGTATTAAGAAATGTCCTTTTGAAGCAATCGAAACTATCAACTTGCCAAAGGAATTATTGGAAAAAGATACCACTCATAGATATGGTCCTAATACCTTTAAGCTTTACAGGTTGCCGGTTCCCAGGCCGGGGCAAGTGCTTGGTTTGGTTGGGACAAATGGAATTGGCAAGTCCACTGCACTTACGATTTTGGCTGGAGTAATCAAGCCCAACTTGGGTCGTTTCACAGAACCCCCTGATTGGAAGGAAATTTTGAGCCATTTTCGAGGATCTGAATTGCAGAATTACTTTACTCGCATGCTAGAGGATGATGTGAAGGCTCGCATCAAGCCTCAGTATGTTGACCACATTCCAAAAGTAGGGCAAGGGAACGTGGGGGAGGAGCTAGACCGAATAAATGAGAGAGATATGAAGGAAAAGCTTTGTGCTGATCTTGAGCTTAATCAAGTTATAGATCGTAATGTTGGTGATCTTTCAGGGGGTGAGCTCCAAAGGTTTGCCATTGCAGGCGTTGCCATCCGAAATGCTGAGATATACATGTTTGATGAACCTTCCAGTTATCTTGATGTGAAACAGAGGCTGAAAGCTGCTGATGTTGTTCGGTCATTGCTCAGGCCTAATAGCTATGTAATTGTTGTCGAGCACGATCTTAGTGTTTTGGACTACTTATCAGACTTTATTTGCTGTTTGTATGGCCAACCTGGTGTATACGGTGTTGTAACACTTCCTTTCTCAGTCAGAGAAGGAATTAATATCTTCTTGGCCGGCTTTGTTCCAACAGAAAATCTTAGGTTTCGGGATGTCCCTCTTACTTTAAAGGTTGCGGAGACTCCACAGGAAACTGCTCAGGAAGCTCAAACTTATGCTCGATTCAACTACCCAACCATGACTAAAACTCAAGGCAATTTCAGGCTTCATGTAGTTGAAGGAGAATTTACAGATTCACAGATTATTGTGATGCTGGGCGAGAATGGGACAGGAAAGACAACATTCATTCGTATGCTGGCTGGTTTGTTGAAACCCGATACTATAGAAGGTGGATCAGATGTGGAGATGCCCGAGTTCAACGTATCATACAAACCTCAGAAAATTAGCTCAAAGTCCCAATTACATGTTAGACACTTGCTAAAACAAAAAATCGGTGATAAATATACCGAGGACCAGTTTAATTCAGATGTGATGAAGCCACTACTTATGGAACAGTTGATGGACCAAGAGATTCAAAATCTTTCTGGTGGAGAGTTGCAAAGAGTTGCCTTATGCCTTTGTCTTGGAAAGCCTGCAGACATCTATCTGATAGATGAGCCAAGTGCATATCTTGATTCGGAACAGCGTATTGTTGCTGCTAAAACCTTTATCGTTGAGCATGATTTCATCATGGCAAATTATCTTGCTGACAGAGTTATCGTTTACGAGGGTCAACCTTCAATTGATTGTACTGCAAATTGTCCACAATCATTGCTTACTGGGATGAACCTTTTCTTATCTCATCTTGATATCACATTTAGAAGAGACCCAACTAATTTCCGCCCAAGGATCAACAAACGTGGATCAACAAAGGACAGAGAGCAAAAGCTTGCTGGGTCTTATTATTACCTTGATGACAGAGTTTATATACTCAAAAGGCAGGTTTGTTTGTACGTTTCTGCATTTGCTATTGCTCTTGGAACACCTCTACCTTTCATTGCAACTGGAAACTGA 1869 0.4232 MSDGKTRIAIVSNDRCKPKKCRQECKRSCPVVGTVEVTSASKVAFISEDLCTGCRICIKKCPFEAIETINLPKELLEKDTTHRYGPNTFKLYRLPVPRPGQVLGLVGTNGIGKSTALTILAGVIKPNLGRFTEPPDWKEILSHFRGSELQNYFTRMLEDDVKARIKPQYVDHIPKVGQGNVGEELDRINERDMKEKLCADLELNQVIDRNVGDLSGGELQRFAIAGVAIRNAEIYMFDEPSSYLDVKQRLKAADVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGQPGVYGVVTLPFSVREGINIFLAGFVPTENLRFRDVPLTLKVAETPQETAQEAQTYARFNYPTMTKTQGNFRLHVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTIEGGSDVEMPEFNVSYKPQKISSKSQLHVRHLLKQKIGDKYTEDQFNSDVMKPLLMEQLMDQEIQNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKTFIVEHDFIMANYLADRVIVYEGQPSIDCTANCPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKRGSTKDREQKLAGSYYYLDDRVYILKRQVCLYVSAFAIALGTPLPFIATGN* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6037 622 Pfam Possible Fer4-like domain in RNase L inhibitor, RLI 6 32 IPR007209 -
Mal1g6037 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 528 IPR027417 -
Mal1g6037 622 SUPERFAMILY 4Fe-4S ferredoxins 7 140 - -
Mal1g6037 622 ProSitePatterns ABC transporters family signature. 466 480 IPR017871 GO:0005524
Mal1g6037 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 345 570 IPR003439 GO:0005524
Mal1g6037 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 66 312 IPR003439 GO:0005524
Mal1g6037 622 SMART AAA_5 370 532 IPR003593 -
Mal1g6037 622 SMART AAA_5 99 291 IPR003593 -
Mal1g6037 622 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 7 40 IPR017896 -
Mal1g6037 622 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 591 IPR013283 -
Mal1g6037 622 Pfam ABC transporter 99 241 IPR003439 GO:0005524
Mal1g6037 622 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 42 71 IPR017896 -
Mal1g6037 622 CDD ABC_RNaseL_inhibitor_domain1 76 329 IPR034348 -
Mal1g6037 622 Pfam 4Fe-4S binding domain 45 67 IPR017896 -
Mal1g6037 622 Gene3D - 2 329 IPR027417 -
Mal1g6037 622 Gene3D - 335 589 IPR027417 -
Mal1g6037 622 PRINTS ABC transporter family E signature 137 153 IPR013283 -
Mal1g6037 622 PRINTS ABC transporter family E signature 24 39 IPR013283 -
Mal1g6037 622 PRINTS ABC transporter family E signature 48 72 IPR013283 -
Mal1g6037 622 PRINTS ABC transporter family E signature 76 96 IPR013283 -
Mal1g6037 622 PRINTS ABC transporter family E signature 104 129 IPR013283 -
Mal1g6037 622 PRINTS ABC transporter family E signature 153 179 IPR013283 -
Mal1g6037 622 ProSitePatterns ABC transporters family signature. 214 228 IPR017871 GO:0005524
Mal1g6037 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 289 IPR027417 -
Mal1g6037 622 Pfam ABC transporter 363 494 IPR003439 GO:0005524
Mal1g6037 622 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 IPR017900 -
Mal1g6037 622 PANTHER - 1 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6037 Mal-Chr1 138625220 138629659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6037 94 245 Calmodulin-binding Proteins AT2G36910 28.395 4.16e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6037 K06174 - gmx:100797423 1019.99