Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6027 ATGGATGACAAGATAGACACTGCTGAAAAGAAGGTGCTGGTTGATATTGTAAAGTTGGCACAAAAGAAAGGCATGAAGGGTAATATGGGAGACTGGAAAGAATTCTTGAACAATCATGATAAAAGATTTGGGGCAGGTATGAGTGATCCATCAAAGAGGTCCCATGAGGTGTTGGCTGCATTTCTAAAGACATTCTCAAAGGATGAGGATTTGAAGTTTTTTGGTAACATTATGCGCCATCATTCAAATCAATACACGTTAGAGCGACTAAAAGATAGATCTCACGATTCCCTTGAGCAGAGTTTAGTCCAAGTAACTCTCCAGCACCCTTTGTATCCATTGGATTATTCGCTGCCTTCTATTGATGAGGGATGGTTAGTGATAAACCTTAAGAAAAAGGCCAAGGGGATAAAATCCACTACAATGGTTGCTGTTGATTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCTTTAGTCAAAGTCTGTGTTGTAGATCACAATTTAGAGGTCAAACTACACAAACTTGTTAAACCGGAGAAAGCAATCAAAGACTACAAAACAGATATTACCGGTGTCTCTGCTCAAGATCTAGAGACAGTGACTTGCTCCTTAGCTGATATACAGAAATCGATGAAGAAGTTGTTATCAAATGGAACCATATTAGTGGGCCACAGTTTATATAATGATCTACGTGTGCTGAAGCTAGATTATGTTAGAGTGGTCGACACTGCATACATCTTCCAACCCTTGGATGGATCTATTCACAGGAGACCTTCGTTGAATAGTTTGTGTCAGTCTGTGTTGGGCTATGAAGTTCGGAAAAAGGGTGCTTCACATGATTGTCTAGATGATGCATGTGCAACAATGAAACTTGTTCTTGCAAAGATCAAACACGGTGTTGATAAGCCATTTCCATTAACATTGGTTCAAGAGCCTGTTTCAGAAAGTGAGATGGCGAAACTGCTTATTCACAGAATACCAATCGCTGTGAACAGCGAAGCACTACACGAAATTGTTCCTGGAGACTTCACAATAGAACAAAAGCCCTCCCGGAATGGTCAAGGAGATAAGTATTCTGCCTTAGCTATCTTTAAGAACCAACGAGAGGCAAATGATGCATATGAAAATGTCCAAGGCAGCCAAACAAAGGATACAAATGGGCGTCTACAGAAACTTGTCACATGTCGGCTGAGTACAGGCATGAGTGTCAGTCTATTTGTTCGGAAAATGGCAATTGATGAACACCGCAAACAATTGCCAGCTAAGAGAGAATTACAAGTGCTCGAGACGGTTGACATTTTCAAAAACAAAAAAGTAAAAATGGATCCTGAAGTTGAAAAGGATGCTTACTTGAAAGAGATTGAAGCACTGAATAAACGGTTGAAAGAAAGTGAATTGGAGATTGAATCATTGAGGGAACAGTTGAGAAAGGAAGTAAAAGTGGATCCTGAAATTGAAAAGGATGCCCACTTGAAAGAGATTGAAGCACTGAATCAACGATTGAAAGAAAGTGAAGTGGAGATTGAATCATCGAGGGAACAGTTGAGAAAAAAGGACTTTGAAATTGCTACTCTGCATAAAATGGTATCTAACATACAAAAAAGGCAAAAACCTAAAAAATAG 1626 0.3954 MDDKIDTAEKKVLVDIVKLAQKKGMKGNMGDWKEFLNNHDKRFGAGMSDPSKRSHEVLAAFLKTFSKDEDLKFFGNIMRHHSNQYTLERLKDRSHDSLEQSLVQVTLQHPLYPLDYSLPSIDEGWLVINLKKKAKGIKSTTMVAVDCEMVLCEDGTEALVKVCVVDHNLEVKLHKLVKPEKAIKDYKTDITGVSAQDLETVTCSLADIQKSMKKLLSNGTILVGHSLYNDLRVLKLDYVRVVDTAYIFQPLDGSIHRRPSLNSLCQSVLGYEVRKKGASHDCLDDACATMKLVLAKIKHGVDKPFPLTLVQEPVSESEMAKLLIHRIPIAVNSEALHEIVPGDFTIEQKPSRNGQGDKYSALAIFKNQREANDAYENVQGSQTKDTNGRLQKLVTCRLSTGMSVSLFVRKMAIDEHRKQLPAKRELQVLETVDIFKNKKVKMDPEVEKDAYLKEIEALNKRLKESELEIESLREQLRKEVKVDPEIEKDAHLKEIEALNQRLKESEVEIESSREQLRKKDFEIATLHKMVSNIQKRQKPKK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6027 541 SMART exoiiiendus 141 302 IPR013520 -
Mal1g6027 541 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 427 - -
Mal1g6027 541 Gene3D - 137 305 IPR036397 GO:0003676
Mal1g6027 541 Coils Coil 488 519 - -
Mal1g6027 541 CDD REX1_like 143 294 IPR034922 -
Mal1g6027 541 Pfam Exonuclease 143 292 IPR013520 -
Mal1g6027 541 SUPERFAMILY Ribonuclease H-like 142 298 IPR012337 -
Mal1g6027 541 Coils Coil 448 482 - -
Mal1g6027 541 PANTHER SMALL RNA DEGRADING NUCLEASE 2 11 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6027 Mal-Chr1 138368747 138374808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6027 138 308 C2H2 Transcription Factor Family AT3G27970 31.579 8.89e-14 71.2