Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6025 ATGACCTCCGATGAAATTGAAAACTATCTACGGTTTCTCGCAAGTGAGTTTGATTGCTTTTATTTTAAATTCATACTATTATTTGATCATCGCAGCAGCTTTGATTTGATCATGATGTTACCATTCATTGCATTGCATTGCATTGCAGAGATACCTTCTGGTGTGAAAGCGAATGATATATGTAAGGATGGAGGTTTGTTAATGTACATACTCGAGAAGGGGAAGAAGGGGGGTCCAGATTGTCAAAACCCTCATGATCTTGATCATGTTTTAGTTAAGTACGAAGTACGTCTTTTTGACGATGGAACACTTGTATCAAAATCTCATGATTATGGAGTCAAGTTCATACTAAAGGATGGCCATTTTTGTCCTGCATTCTCAAAGGTTGTTAAGACCATGGGAAAGAGAGATAAAGCCATTGTGATCGTCAAGCCCCAATATGGATTTGGTGAAAAGGGCAAGCCAGCTGATGATGATCAAGCTTCAGTTCCGCCTAATGCAACATTGGAAATTACTCTCAGGTTACTTAATTGGAAGAAAGTACCTTTTTTTAAGATGGTCCTCAAGGAAGGAGAAGGATATGAGTGTCCAAATAAGGGAGCTGTTGTCAAATTGAAATTAATTGGTAAGCTGCAAGATAGCACTGTATTTTTTACCAAGGGCCATGGTGATGATGATGATGATCAAGCACAGTTGTTTGAATTTAAAACAAATGAGAAGCAAGTGATTAAGGGGCTTGATAGAGCTGTAATGACCATGAAGAAGGGTGAGGTAGCTTTCTTGACTATTGGGCCTAAATATGTGTTTGGTTCTCAGCCTAAGTCAGACTTTGCTCCTCCTAATTCAACCGTGTATTACGAGGTTGAGCTAGTATCATTCGTAAAGGGTAAGGAGATCTCGGACATGAACACTAAAGAGAAGATAGAAGTTGCTCGTAAGAAGATAGAAAAAGGGAAAGCATTGTACCGAGCTGATGAAGATGAAAGAGCTTCTAAAAGATTTGAGAAGGCTCTAAAGTTCATAAAGAATGATATTTCCTTCCGTGGTAAGCAGAAGAAATATAAGAAATATGCCATGGACTTGAAGGATTATTGTACCGAGAAAATTGCTGGATGCAGAGAGGATTATAAAGAGGCTCAGATTGCCTTTTTTGATACACGGACCAGAAACTATGAATGCAGAATAATGCATGATATGTTTATGCAAAAAATGGACAATTTTTATTTTACCGAAGGGCTTGTCGAAGTGATTTGCAAACATTGTAAAGGAACATGTTTTTTTTTTTGA 1287 0.3784 MTSDEIENYLRFLASEFDCFYFKFILLFDHRSSFDLIMMLPFIALHCIAEIPSGVKANDICKDGGLLMYILEKGKKGGPDCQNPHDLDHVLVKYEVRLFDDGTLVSKSHDYGVKFILKDGHFCPAFSKVVKTMGKRDKAIVIVKPQYGFGEKGKPADDDQASVPPNATLEITLRLLNWKKVPFFKMVLKEGEGYECPNKGAVVKLKLIGKLQDSTVFFTKGHGDDDDDQAQLFEFKTNEKQVIKGLDRAVMTMKKGEVAFLTIGPKYVFGSQPKSDFAPPNSTVYYEVELVSFVKGKEISDMNTKEKIEVARKKIEKGKALYRADEDERASKRFEKALKFIKNDISFRGKQKKYKKYAMDLKDYCTEKIAGCREDYKEAQIAFFDTRTRNYECRIMHDMFMQKMDNFYFTEGLVEVICKHCKGTCFFF* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6025 428 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 293 379 - -
Mal1g6025 428 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 49 184 - -
Mal1g6025 428 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 185 299 - -
Mal1g6025 428 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 200 294 IPR001179 GO:0003755
Mal1g6025 428 PANTHER PEPTIDYLPROLYL ISOMERASE 49 184 - -
Mal1g6025 428 Gene3D Tetratricopeptide repeat domain 296 385 IPR011990 GO:0005515
Mal1g6025 428 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 84 175 IPR001179 GO:0003755
Mal1g6025 428 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 195 291 IPR001179 GO:0003755
Mal1g6025 428 SUPERFAMILY FKBP-like 185 311 - -
Mal1g6025 428 PANTHER PEPTIDYLPROLYL ISOMERASE 293 379 - -
Mal1g6025 428 PANTHER PEPTIDYLPROLYL ISOMERASE 185 299 - -
Mal1g6025 428 SUPERFAMILY FKBP-like 56 182 - -
Mal1g6025 428 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 87 179 IPR001179 GO:0003755
Mal1g6025 428 Gene3D - 56 179 IPR046357 GO:0003755
Mal1g6025 428 Gene3D - 182 295 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6025 Mal-Chr1 138309912 138314573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6025 59 380 Calmodulin-binding Proteins AT3G25230 55.522 1.84e-109 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6025 K09571 - egt:105955963 361.688