LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g6022	ATGGAAGTTCTAGTGCTTGTTTATCTAATACCAATCCTTATTCTATTCATTATCCACATACACAAAACAAAGAGTACTAGAAGAGCATCATCAACTCCACCAGGTCCAAAACCACTTCCACTAATTGGAAATTTACACCAGCTTGACCCTTCATCCCCACATCACTCCCTATGGCAACTTTCCAAACACTATGGACCTATCATGTCTTTGCACCTTGGTTACATACCAACCTTAGTTATTTCTTCATCAAAAATGGCAGAACAAGTGTTGAAAACCCATGACCTTAAATTTGCAAGTAGACCATCTTTTCTTGGACTAAGAAAATTGTCTTACAATGGTTTAGATCTTGCTTTAGCACCTTATAGTCCTTATTGGAGAGAAATGAGAAAACTTTGTGTTCATCACCTCTTTAGCTCTCAATGTGTCCATTCTTTTAGGCCTATTAGAGAAAATGAAGTGGCCCAATTGATTCAAAAGTTGTCACAATATGATGGTGATGAAAAAGGTGTGAACTTGAGTGAAATATTGATGTCTCTCACAAATACAATTATATGTAAGATAGCTTTTGGTAAAACATATGTTTGTGATTATGAAGAAGAAGTTGAATTGGGAAGTGGACAAAAGAGAAGTAGATTGCAAATTTTGCTTAATGAAGCTCAAGCTTTGTTAACTGAATTTTACTTTTCAGATAATTTTCCATTGTTGGGTTGGATTGATAGACTCAAAGGAACTCTTGGGAGGCTTGATAAAACGTTCAAGGAGTTGGATTTGATATACCAAAGAGTTATTGATGACCACCTGGATAATTCAGCAAGGCCTAAAACTAAGGAACAAGAAGTAGATGATATAATTGATATACTTCTACAGATGATGAATGATAACTCACTCTCATTTGATCTCACACTTGACCATATCAAAGCTTTTCTTATGAACATCTTTATAGCAGGAACAGACACAAGTTCAGCAGTAGTGGTTTGGGCTATGACAGCATTGATGAACAATTCTAGAGTGATGAACAAGGTTCAAATGGAAATCAAAAGCTTATATGAAGACAAAGTTTTTATAAATGAAGATGATATTGAAAAGCTTCCTTATCTTAAACTGGTGGTGAAAGAGACATTAAGATTATTCCCTCCATCACCATTACTATTGCCAAGAGAAACAATAGAAAATTGTAACATAGATGGTTATGAGATTAAACCAAAAACTCTAGTGTATGTTAATGCATGGGCCATAGCAAGAGATCCTGAGAATTGGGAAGACCCTGAAGAGTTTTATCCTGAAAGATTCTTTATGAGTTCAGTGGATTTTAAAGGGAAGAATTTTGAGCTGATTCCATTTGGAAGTGGAAGAAGAATGTGTCCAGCAATGAACATGGGAGTGGTCACTGTTGAGCTTACACTTGCTAATCTTCTTCACTCTTTTCATTGGAAATTGCCTCATGGTTTTGATAAGGAACAAGTATTGGATACACAAGTGAAACCAGGAATAACTATGCATAAGAAAATTGATCTTTACCTTGTTCCTAGGAAAAGAAAACCATAG	1545	0.354	MEVLVLVYLIPILILFIIHIHKTKSTRRASSTPPGPKPLPLIGNLHQLDPSSPHHSLWQLSKHYGPIMSLHLGYIPTLVISSSKMAEQVLKTHDLKFASRPSFLGLRKLSYNGLDLALAPYSPYWREMRKLCVHHLFSSQCVHSFRPIRENEVAQLIQKLSQYDGDEKGVNLSEILMSLTNTIICKIAFGKTYVCDYEEEVELGSGQKRSRLQILLNEAQALLTEFYFSDNFPLLGWIDRLKGTLGRLDKTFKELDLIYQRVIDDHLDNSARPKTKEQEVDDIIDILLQMMNDNSLSFDLTLDHIKAFLMNIFIAGTDTSSAVVVWAMTALMNNSRVMNKVQMEIKSLYEDKVFINEDDIEKLPYLKLVVKETLRLFPPSPLLLPRETIENCNIDGYEIKPKTLVYVNAWAIARDPENWEDPEEFYPERFFMSSVDFKGKNFELIPFGSGRRMCPAMNMGVVTVELTLANLLHSFHWKLPHGFDKEQVLDTQVKPGITMHKKIDLYLVPRKRKP*	515

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g6022	514	PRINTS	P450 superfamily signature	315	332	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	P450 superfamily signature	368	379	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	P450 superfamily signature	445	454	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PANTHER	CYTOCHROME P450 83B1	9	511	-	-
	Mal1g6022	514	PANTHER	CYTOCHROME P450 71B11-RELATED	9	511	-	-
	Mal1g6022	514	SUPERFAMILY	Cytochrome P450	33	512	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	Gene3D	Cytochrome P450	22	512	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	447	456	IPR017972	GO:0005506\|GO:0016705
	Mal1g6022	514	Pfam	Cytochrome P450	33	502	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	85	106	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	304	321	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	367	385	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	444	454	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	324	350	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	179	197	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	408	432	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mal1g6022	514	PRINTS	E-class P450 group I signature	454	477	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g6022	Mal-Chr1	138285660	138287866	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g6022	3	511	Cytochrome P450	AT4G31500	45.312	1.71e-155	451

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g6022	-		-	gmx:606704	674.085

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g6022	1	138285660	138287866	Mal1g6022	1	138285660	138287866	ECH