Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6003 ATGGACGACCGTGAAAATGGAAGGCACAAAGCAGATCAATATAAATCTGCTCAGGGACAGTGGTTGATGCAACAACATCAGCATCAGCATCCTTCTATGAAGCAGATTATGGCAATCATGGCTGAACGAGATGCAGCCATTCAAGAAAGAAATCTGGCCCTTTCTGAGAAAAAGGCAGCACTTGCAGAACGTGACATGGCATTTCTGCAGCGGGATACTGCGATTGCGGAACGGAATAATGCACTTATGGAAAGAGATAATGCGATAGCAACCCTTCAGTTTCGAGAAAACGCTTTGGCCAATGGCGGTATGTCATCATGCCCTCCAGGATGTCAAATCTCACGGGGAGTTAAGCATATACATCATCTGCCGCAACAGGTAAACCATTTGCCTAATATGGGTGATTCTTCTTACGGCACACGTGAACTGCACACAACCGATGCCCTCCCAGCAGCACCCATTTCTTCAGAGGTTGGGAAACCACCTAGGCGGGCCAAACGACCAAAGGAAAGTAAGTCTGATTCACCTAACAAGAAGACTCCAAAATCTAGAAAGCTCAAGAAAGAGGGTGAAGATTTAAACAAGACAATGTTTGCTAACAACAAAGAACTTGAATGGAAGACTAGCGAGGAAATTATAAATGGAGGTGACGATCTTAACAAACAGTTAGTAGTCTCAAAGGCTGATTGGAAACCTCAGGACTTGGCATTGAACCAAGTTGCATACGATGATTCAACCATGCCAGCGCCAGCGTGCTCTTGTACTGGCGCTCTGAGACAGTGCTACAAATGGGGTAATGGAGGTTGGCAATCTGCTTGCTGTACAACCACTTTATCGGTGTATCCACTTCCAGCAGTGCCTAACAAAAGGCACGCTCGGATAGGCGGTAGAAAAATGAGTGGAAGTGCTTTCAATAAACTGCTTAGCCGGCTTGCAGCCGAAGGGCATGATCTCTCACATCCAGTTGACCTTAAAGACCATTGGGCCAAACATGGTACAAATCGATACATCACAATAAAGTAG 1023 0.4575 MDDRENGRHKADQYKSAQGQWLMQQHQHQHPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNALMERDNAIATLQFRENALANGGMSSCPPGCQISRGVKHIHHLPQQVNHLPNMGDSSYGTRELHTTDALPAAPISSEVGKPPRRAKRPKESKSDSPNKKTPKSRKLKKEGEDLNKTMFANNKELEWKTSEEIINGGDDLNKQLVVSKADWKPQDLALNQVAYDDSTMPAPACSCTGALRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARIGGRKMSGSAFNKLLSRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6003 340 MobiDBLite consensus disorder prediction 160 193 - -
Mal1g6003 340 MobiDBLite consensus disorder prediction 147 193 - -
Mal1g6003 340 PANTHER - 3 340 IPR010409 -
Mal1g6003 340 Coils Coil 52 72 - -
Mal1g6003 340 MobiDBLite consensus disorder prediction 1 32 - -
Mal1g6003 340 MobiDBLite consensus disorder prediction 17 32 - -
Mal1g6003 340 Pfam GAGA binding protein-like family 1 340 IPR010409 -
Mal1g6003 340 SMART GAGA_bind_2 1 340 IPR010409 -
Mal1g6003 340 PANTHER PROTEIN BASIC PENTACYSTEINE6 3 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6003 Mal-Chr1 137972114 137973269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g6003 66 340 BBR or BPC Transcription factor family AT5G42520 61.168 9.02e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mal1g6003 GAGA_bind 3.6e-103 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g6003 - - mtr:MTR_1g023660 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6003 1 137972114 137973269 Mal1g6003 1 137972114 137973269 ECH